RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 QPRTQ15274 297 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 PRR23CQ6ZRP0 262 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 EXD3Q8N9H8 876 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 FADS6Q8N9I5 356 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 OR5M3Q8NGP4 307 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 ZNF563Q8TA94 476 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 RASL10BQ96S79 203 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 NXF2Q9GZY0 626 aaKnown RBP15.64■□□□□ 0.09
VPS13B-201ENST00000355155 FANCFQ9NPI8 374 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 SDHAF3Q9NRP4 125 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 ZNF208O43345 1280 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 CH25HO95992 272 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 C1DQ13901 141 aaKnown RBP15.64■□□□□ 0.09
VPS13B-201ENST00000355155 ADGRG3Q86Y34 549 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 TMCO5AQ8N6Q1 288 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 BBS1Q8NFJ9 593 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 OR51A7Q8NH64 312 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 SPACA9Q96E40 222 aaPredicted RBP15.64■□□□□ 0.09
VPS13B-201ENST00000355155 DEPDC7Q96QD5 511 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 H2AFY2Q9P0M6 372 aaPredicted RBP15.64■□□□□ 0.09
VPS13B-201ENST00000355155 PADI1Q9ULC6 663 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 RALGAPA1Q6GYQ0 2036 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 B4DXG7 233 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 MCIDASD6RGH6 385 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 MYL12AP19105 171 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 GALP22466 123 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 APOBEC1P41238 236 aaKnown RBP15.63■□□□□ 0.09
VPS13B-201ENST00000355155 SSPNQ14714 243 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 FAM199XQ6PEV8 388 aaPredicted RBP15.63■□□□□ 0.09
VPS13B-201ENST00000355155 RNF217Q8TC41 542 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 C8orf44Q96CB5 159 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 ZBTB20Q9HC78 741 aaPredicted RBP15.63■□□□□ 0.09
VPS13B-201ENST00000355155 SEC14L4Q9UDX3 406 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 CAB39Q9Y376 341 aaPredicted RBP15.63■□□□□ 0.09
VPS13B-201ENST00000355155 A8MVM7 634 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 MYL12BO14950 172 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 MT-CO3P00414 261 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 GADD45AP24522 165 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 GPR50Q13585 617 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 TOMM34Q15785 309 aaPredicted RBP15.63■□□□□ 0.09
VPS13B-201ENST00000355155 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.63■□□□□ 0.092e-7■■■□□ 17.9
VPS13B-201ENST00000355155 COL28A1Q2UY09 1125 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 PLBD1Q6P4A8 553 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 NPEPL1Q8NDH3 523 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 OR11G2Q8NGC1 345 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 TEAD3Q99594 435 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 DEFB126Q9BYW3 111 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 ERVK13-1Q9NX77 482 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 CCDC59Q9P031 241 aaKnown RBP15.63■□□□□ 0.09
VPS13B-201ENST00000355155 LAMA1P25391 3075 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 NPIPB13A6NJU9 1138 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 NPIPB4C9JG80 1138 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 AIREO43918 545 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 CLPXO76031 633 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 CD14P08571 375 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 ZNF182P17025 639 aaPredicted RBP15.63■□□□□ 0.09
VPS13B-201ENST00000355155 PRKCAP17252 672 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 PAICSP22234 425 aaKnown RBP15.63■□□□□ 0.09
VPS13B-201ENST00000355155 USP43Q70EL4 1123 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 LRRC17Q8N6Y2 441 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 TAAR8Q969N4 342 aa15.63■□□□□ 0.09
VPS13B-201ENST00000355155 YARS2Q9Y2Z4 477 aaKnown RBP15.63■□□□□ 0.09
VPS13B-201ENST00000355155 SF3B6Q9Y3B4 125 aaKnown RBP15.63■□□□□ 0.09
VPS13B-201ENST00000355155 TMED7-TICAM2A0A0A6YYA0 188 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 A0A1W2PNU3 283 aaPredicted RBP15.62■□□□□ 0.09
VPS13B-201ENST00000355155 TMEM72A0PK05 275 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 C9orf172C9J069 976 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 WWP2O00308 870 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 FOXD2O60548 495 aaPredicted RBP15.62■□□□□ 0.09
VPS13B-201ENST00000355155 HPP00738 406 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 CXCR1P25024 350 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 IDUAP35475 653 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 MLLT10P55197 1068 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 ZP4Q12836 540 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 MOGQ16653 247 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 GPR139Q6DWJ6 353 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 CD200R1LQ6Q8B3 271 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 TIPARPQ7Z3E1 657 aaKnown RBP15.62■□□□□ 0.09
VPS13B-201ENST00000355155 PPP1R32Q7Z5V6 425 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 KTI12Q96EK9 354 aaPredicted RBP15.62■□□□□ 0.09
VPS13B-201ENST00000355155 MOGAT1Q96PD6 335 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 TIMP4Q99727 224 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 HCAR1Q9BXC0 346 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 NANSQ9NR45 359 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 TMED7Q9Y3B3 224 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 WIF1Q9Y5W5 379 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 DXOO77932 396 aaKnown RBP15.62■□□□□ 0.09
VPS13B-201ENST00000355155 CD53P19397 219 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 TGM1P22735 817 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 CRMP1Q14194 572 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 MED22Q15528 200 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 TSTQ16762 297 aaKnown RBP15.62■□□□□ 0.09
VPS13B-201ENST00000355155 POMGNT2Q8NAT1 580 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 DUSP19Q8WTR2 217 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 ERMAPQ96PL5 475 aaPredicted RBP15.62■□□□□ 0.09
VPS13B-201ENST00000355155 CHCHD3Q9NX63 227 aaKnown RBP15.62■□□□□ 0.09
VPS13B-201ENST00000355155 TCFL5Q9UL49 500 aa15.62■□□□□ 0.09
VPS13B-201ENST00000355155 CHCHD2Q9Y6H1 151 aaPredicted RBP15.62■□□□□ 0.09
VPS13B-201ENST00000355155 ASCC3Q8N3C0 2202 aaKnown RBP15.61■□□□□ 0.09
VPS13B-201ENST00000355155 PCSK5Q92824 1860 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms