RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ANKRD19PQ9H560 264 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 WDR26Q9H7D7 661 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 TMEM185BQ9H7F4 350 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 PELI2Q9HAT8 420 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 CAPN10Q9HC96 672 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 MRPS30Q9NP92 439 aaKnown RBP8.67□□□□□ -1.02
SMG6-202ENST00000354901 PRSS16Q9NQE7 514 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ENTPD4Q9Y227 616 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 REV3LO60673 3130 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 C1QTNF3-AMACRE9PGA6 284 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 FCMRO60667 390 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 PRAMEF2O60811 474 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ICOSLGO75144 302 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 LGI1O95970 557 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 HLA-DQB1P01920 261 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ZNF35P13682 527 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 DRD2P14416 443 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 GNSP15586 552 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 PAICSP22234 425 aaKnown RBP8.67□□□□□ -1.02
SMG6-202ENST00000354901 LBX1P52954 281 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ID2Q02363 134 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 SLC3A1Q07837 685 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 TGIF1Q15583 401 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 TMEM17Q86X19 198 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ETFBKMTQ8IXQ9 262 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ACOT4Q8N9L9 421 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 OR5M1Q8NGP8 315 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 OR2A1Q8NGT9 310 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 EDARADDQ8WWZ3 215 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 HGDQ93099 445 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 LURAP1Q96LR2 239 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 CAMK1GQ96NX5 476 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 SSX3Q99909 188 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 FAIM2Q9BWQ8 316 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ALPK2Q86TB3 2170 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ARID1BQ8NFD5 2236 aaPredicted RBP8.67□□□□□ -1.02
SMG6-202ENST00000354901 A0A1W2PRQ8 180 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ARRDC5A6NEK1 342 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 EFCAB7A8K855 629 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 SLC2A10O95528 541 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 AIFM1O95831 613 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 PRG2P13727 222 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 CPEP16870 476 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 RFC3P40938 356 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 RFX3P48380 749 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 KHKP50053 298 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 SORDQ00796 357 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 PRDX1Q06830 199 aaKnown RBP8.67□□□□□ -1.02
SMG6-202ENST00000354901 FABP9Q0Z7S8 132 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ZNF528Q3MIS6 628 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 OR2B11Q5JQS5 317 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 H3F3CQ6NXT2 135 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 SMARCD3Q6STE5 483 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 DPPA2Q7Z7J5 298 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 NKAIN4Q8IVV8 208 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 SLITRK4Q8IW52 837 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 MS4A4EQ96PG1 132 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 ZNF471Q9BX82 626 aaPredicted RBP8.67□□□□□ -1.02
SMG6-202ENST00000354901 PINK1Q9BXM7 581 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 SYNPO2LQ9H987 977 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 UNKLQ9H9P5 680 aaKnown RBP8.67□□□□□ -1.02
SMG6-202ENST00000354901 MBD2Q9UBB5 411 aa8.67□□□□□ -1.02
SMG6-202ENST00000354901 VCANP13611 3396 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 A0A1B0GW55 424 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 G3V3Q6 166 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 SLC31A1O15431 190 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 NFATC1O95644 943 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 DUX4L2P0CJ85 424 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 DUX4L3P0CJ86 424 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 DUX4L4P0CJ87 422 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 DUX4L5P0CJ88 424 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 DUX4L6P0CJ89 424 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 DUX4L7P0CJ90 424 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 MTNR1AP48039 350 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 SEC13P55735 322 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 RGS8P57771 180 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 RAB5BP61020 215 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 ZNF765Q7L2R6 523 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 BBS1Q8NFJ9 593 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 ZCCHC10Q8TBK6 192 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 POLDIP3Q9BY77 421 aaKnown RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 MFFQ9GZY8 342 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 SEMA4GQ9NTN9 838 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 DUX4Q9UBX2 424 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 GPN3Q9UHW5 284 aaPredicted RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 CACNA1IQ9P0X4 2223 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 PMS2P1A4D2B8 440 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 WRBO00258 174 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 MAN2B1O00754 1011 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 GOSR2O14653 212 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 SLC19A2O60779 497 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 NR2C1P13056 603 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 NQO2P16083 231 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 UGT2B7P16662 529 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 FUT1P19526 365 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 S100PP25815 95 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 CDH11P55287 796 aa8.66□□□□□ -1.02
SMG6-202ENST00000354901 SEC61A1P61619 476 aaKnown RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 SNRPNP63162 240 aaKnown RBP8.66□□□□□ -1.02
SMG6-202ENST00000354901 TGM3Q08188 693 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms