RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 TMEM82A0PJX8 343 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 FAM86C2PA6NEL3 165 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 LINC00587B1AMM8 73 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 PYCARD-AS1I3L0S3 204 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 HEXAP06865 529 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 CALCBP10092 127 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 OR12D2P58182 307 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 PPP2CBP62714 309 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 PPP2CAP67775 309 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 CDK5R1Q15078 307 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 LIN54Q6MZP7 749 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 PUSL1Q8N0Z8 303 aaKnown RBP13.78□□□□□ -0.2
TRAF3-202ENST00000351691 SYS1Q8N2H4 156 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 KCNRGQ8N5I3 272 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 ZNF740Q8NDX6 193 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 ZNF251Q9BRH9 671 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 OR52D1Q9H346 318 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 ZNF768Q9H5H4 540 aaKnown RBP13.78□□□□□ -0.2
TRAF3-202ENST00000351691 GPR34Q9UPC5 381 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 CARHSP1Q9Y2V2 147 aaKnown RBP13.78□□□□□ -0.2
TRAF3-202ENST00000351691 AK6Q9Y3D8 172 aaKnown RBP13.78□□□□□ -0.2
TRAF3-202ENST00000351691 PLEKHM1Q9Y4G2 1056 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 WNT6Q9Y6F9 365 aa13.78□□□□□ -0.2
TRAF3-202ENST00000351691 LAMA3Q16787 3333 aa13.77□□□□□ -0.2
TRAF3-202ENST00000351691 ZC3H12DA2A288 527 aaKnown RBP13.77□□□□□ -0.21
TRAF3-202ENST00000351691 ANTXRLA6NF34 631 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 NUDT19A8MXV4 375 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 SULT1C2O00338 296 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 GOSR2O14653 212 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 TBX6O95947 436 aaPredicted RBP13.77□□□□□ -0.21
TRAF3-202ENST00000351691 S100A6P06703 90 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 FABP1P07148 127 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 HNRNPA1P09651 372 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAF3-202ENST00000351691 PRG2P13727 222 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 SLC2A5P22732 501 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 NOS3P29474 1203 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 PYCR1P32322 319 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 GDI2P50395 445 aaKnown RBP13.77□□□□□ -0.21
TRAF3-202ENST00000351691 HTRA4P83105 476 aaPredicted RBP13.77□□□□□ -0.21
TRAF3-202ENST00000351691 DPTQ07507 201 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 MELKQ14680 651 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 C2orf68Q2NKX9 166 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 C6orf132Q5T0Z8 1188 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 VN1R2Q8NFZ6 395 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 OR5J2Q8NH18 312 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 MYLIPQ8WY64 445 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 SMPDL3BQ92485 455 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 SLC38A1Q9H2H9 487 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 MED20Q9H944 212 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 PELI2Q9HAT8 420 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 SLC27A6Q9Y2P4 619 aa13.77□□□□□ -0.21
TRAF3-202ENST00000351691 GPR55Q9Y2T6 319 aaPredicted RBP13.77□□□□□ -0.21
TRAF3-202ENST00000351691 IFITM5A6NNB3 132 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 RFXAPO00287 272 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 CDC42EP2O14613 210 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 VEGFDO43915 354 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 GPRIN2O60269 458 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 EN2P19622 333 aaPredicted RBP13.76□□□□□ -0.21
TRAF3-202ENST00000351691 HAAOP46952 286 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 RPS11P62280 158 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAF3-202ENST00000351691 CBFBQ13951 182 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 DHCR24Q15392 516 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 AVPI1Q5T686 147 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 KRT77Q7Z794 578 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 NUDT13Q86X67 352 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 MRPL43Q8N983 215 aaKnown RBP13.76□□□□□ -0.21
TRAF3-202ENST00000351691 TMEM185AQ8NFB2 350 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 OR56A1Q8NGH5 318 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 OR52B4Q8NGK2 314 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 OR13C5Q8NGS8 318 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 ZFPM2Q8WW38 1151 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 HAVCR1Q96D42 359 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 NUS1Q96E22 293 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 ENKD1Q9H0I2 346 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 ALX4Q9H161 411 aaPredicted RBP13.76□□□□□ -0.21
TRAF3-202ENST00000351691 MYEF2Q9P2K5 600 aaKnown RBP13.76□□□□□ -0.21
TRAF3-202ENST00000351691 GATCO43716 136 aaKnown RBP13.76□□□□□ -0.21
TRAF3-202ENST00000351691 PIP5K1CO60331 668 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 OR2F2O95006 317 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 THY1P04216 161 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 ACADLP28330 430 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 DCTDP32321 178 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 GPR1P46091 355 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 TAS2R38P59533 333 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 STXBP1P61764 594 aaKnown RBP13.76□□□□□ -0.21
TRAF3-202ENST00000351691 ACTA2P62736 377 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 ACTG2P63267 376 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 OR2F1Q13607 317 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 TSTA3Q13630 321 aaPredicted RBP13.76□□□□□ -0.21
TRAF3-202ENST00000351691 GAS6Q14393 721 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 TMEM69Q5SWH9 247 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 PRAMEF14Q5SWL7 426 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 RPL22L1Q6P5R6 122 aaKnown RBP13.76□□□□□ -0.21
TRAF3-202ENST00000351691 RPTNQ6XPR3 784 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 TRAPPC5Q8IUR0 188 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 SERPINA12Q8IW75 414 aa13.76□□□□□ -0.21
TRAF3-202ENST00000351691 RNF113BQ8IZP6 322 aaKnown RBP13.76□□□□□ -0.21
TRAF3-202ENST00000351691 OR6N1Q8NGY5 312 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms