RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GJD2Q9UKL4 321 aa18.14■□□□□ 0.5
HDAC4-201ENST00000345617 OR2T7P0C7T2 308 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 MS4A2Q01362 244 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 MEF2AQ02078 507 aaPredicted RBP18.14■□□□□ 0.49
HDAC4-201ENST00000345617 SEMG2Q02383 582 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 MFSD6LQ8IWD5 586 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 OR2T27Q8NH04 317 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 C14orf79Q96F83 325 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 ALX3O95076 343 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 LCATP04180 440 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 M6PRP20645 277 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 GABRR1P24046 479 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 RFX2P48378 723 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 ACSM1Q08AH1 577 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 ZNF321PQ8N8H1 164 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 PSMF1Q92530 271 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 RCE1Q9Y256 329 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 INSL5Q9Y5Q6 135 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 AQP9O43315 295 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 PTGER4P35408 488 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 OLIG2Q13516 323 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 KCNK12Q9HB15 430 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 CCDC85CA6NKD9 419 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 GIPP09681 153 aaPredicted RBP18.14■□□□□ 0.49
HDAC4-201ENST00000345617 LCTLQ6UWM7 567 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 TMEM59Q9BXS4 323 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 HRH3Q9Y5N1 445 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 ARL16Q0P5N6 197 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 SLC17A1Q14916 467 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 P2RY14Q15391 338 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 LCN10Q6JVE6 187 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 SLC30A3Q99726 388 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 B4GALT6Q9UBX8 382 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 NDRG2Q9UN36 371 aaKnown RBP18.14■□□□□ 0.49
HDAC4-201ENST00000345617 STATHP02808 62 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 RPS18P62269 152 aaKnown RBP18.14■□□□□ 0.49
HDAC4-201ENST00000345617 SLC39A13Q96H72 371 aa18.14■□□□□ 0.49
HDAC4-201ENST00000345617 GPR32O75388 356 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 SLC1A3P43003 542 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 LAX1Q8IWV1 398 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 SLC25A46Q96AG3 418 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 ZMYND19Q96E35 227 aaPredicted RBP18.13■□□□□ 0.49
HDAC4-201ENST00000345617 OGFOD3Q6PK18 319 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 MED18Q9BUE0 208 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 POFUT1Q9H488 388 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 MOKQ9UQ07 419 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 PI4KAP42356 2102 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 RPL17P18621 184 aaKnown RBP18.13■□□□□ 0.49
HDAC4-201ENST00000345617 SORDQ00796 357 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 ASAH1Q13510 395 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 CAMK2BQ13554 666 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 RPS26P11Q5JNZ5 115 aaPredicted RBP18.13■□□□□ 0.49
HDAC4-201ENST00000345617 RNLSQ5VYX0 342 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 SCPEP1Q9HB40 452 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 NPIPA5A0A0B4J1W7 369 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 DDAH2O95865 285 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 PNPP00491 289 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 POLR2CP19387 275 aaPredicted RBP18.13■□□□□ 0.49
HDAC4-201ENST00000345617 NPY5RQ15761 445 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 PGGHGQ32M88 737 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 CTSL3PQ5NE16 218 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 FBXW12Q6X9E4 464 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 DNAJC5GQ8N7S2 189 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 OR9K2Q8NGE7 335 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 DEFB118Q96PH6 123 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 C1QBP02746 253 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 SFXN4Q6P4A7 337 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 LYSMD1Q96S90 227 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 SLC25A18Q9H1K4 315 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 KCNK6Q9Y257 313 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 RAB3CQ96E17 227 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 UNCXA6NJT0 531 aa18.13■□□□□ 0.49
HDAC4-201ENST00000345617 TRHRP34981 398 aaPredicted RBP18.13■□□□□ 0.49
HDAC4-201ENST00000345617 ERVPABLB-1P60509 514 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 SUMO1P63165 101 aaKnown RBP18.12■□□□□ 0.49
HDAC4-201ENST00000345617 SLC7A9P82251 487 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 CMTM8Q8IZV2 173 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 SIGLECL1Q8N7X8 197 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 OR8J2Q8NGG1 315 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 TGIF2Q9GZN2 237 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 HAO2Q9NYQ3 351 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 TRAPPC2LH3BP13 241 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 AADACP22760 399 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 SPINT3P49223 89 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 PLCXD3Q63HM9 321 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 TAF9BQ9HBM6 251 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 DMRT3Q9NQL9 472 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 SSBP1Q04837 148 aaKnown RBP18.12■□□□□ 0.49
HDAC4-201ENST00000345617 MEP1BQ16820 701 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 ADGRE4PQ86SQ3 457 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 BOLLQ8N9W6 283 aaKnown RBP18.12■□□□□ 0.49
HDAC4-201ENST00000345617 SLC29A1Q99808 456 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 CLSTN3Q9BQT9 956 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 ZNF541Q9H0D2 1346 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 FABP7O15540 132 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 TACR3P29371 465 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 EMP2P54851 167 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 H3F3CQ6NXT2 135 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 UQCC3Q6UW78 93 aa18.12■□□□□ 0.49
HDAC4-201ENST00000345617 TMIGD2Q96BF3 282 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms