RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ASRGL1Q7L266 308 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 AKAP14Q86UN6 197 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 FCAMRQ8WWV6 532 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 ALG8Q9BVK2 526 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 DOCK5Q9H7D0 1870 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 FASLGP48023 281 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 HLCSP50747 726 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 CNN3Q15417 329 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 CGB2Q6NT52 195 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 MARVELD2Q8N4S9 558 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 PAQR5Q9NXK6 330 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 SLAMF8Q9P0V8 285 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 LRRTM2O43300 516 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 MYF6P23409 242 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 SELPLGQ14242 412 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 PRSS48Q7RTY5 328 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 IQCF2Q8IXL9 164 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 ZNF687Q8N1G0 1237 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC43A2Q8N370 569 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 ZNF420Q8TAQ5 688 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 HMX2A2RU54 273 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF587BE7ETH6 402 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 FBP2O00757 339 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 OR2J2O76002 312 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 CLPXO76031 633 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 ANXA3P12429 323 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 PVALBP20472 110 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 LCN1P31025 176 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 MAP2K4P45985 399 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 TRMT12Q53H54 448 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 SPNS2Q8IVW8 549 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 OR5W2Q8NH69 310 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 GOT1L1Q8NHS2 421 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 APOBEC4Q8WW27 367 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 DPAGT1Q9H3H5 408 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF701Q9NV72 531 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 A0A087WV62 115 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 TCRBV3S1A0A5B6 114 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 TOX3O15405 576 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 PRKYO43930 277 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 MT-ATP6P00846 226 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 CLDN6P56747 220 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 GPR148Q8TDV2 347 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 INTS1Q8N201 2190 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 A0A1B0GWA3 101 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 DPM1O60762 260 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 RAB40BQ12829 278 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 MOGQ16653 247 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 ARHGAP11BQ3KRB8 267 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 C3orf33Q6P1S2 294 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 ARHGAP22Q7Z5H3 698 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF584Q8IVC4 421 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 FAM71F1Q96KD3 344 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 METTL8Q9H825 291 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 DLGAP1O14490 977 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 PSKH1P11801 424 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF16P17020 682 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 CAMKMTQ7Z624 323 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 OR1L3Q8NH93 324 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 QRSL1Q9H0R6 528 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 MOKQ9UQ07 419 aa15.14■□□□□ 0.01
SMARCA4-201ENST00000344626 PIGBOS1A0A0B4J2F0 54 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 CRYABP02511 175 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 MEPCEQ7L2J0 689 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 SAMD12Q8N8I0 201 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 EXD3Q8N9H8 876 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 TMEM163Q8TC26 289 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 AASSQ9UDR5 926 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 TMPRSS11DO60235 418 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 GPX2P18283 190 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 TMBIM6P55061 237 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 CAMK2DQ13557 499 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF791Q3KP31 576 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 PYHIN1Q6K0P9 492 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 NARS2Q96I59 477 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 SLC30A2Q9BRI3 323 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 DNTTIP1Q9H147 329 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 OCIAD1Q9NX40 245 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 DNAJB11Q9UBS4 358 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 A0A1W2PPK0 400 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 MAS1P04201 325 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 IGHV4-34P06331 123 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 SAXO2Q658L1 398 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 TUBB1Q9H4B7 451 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 MED17Q9NVC6 651 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF223Q9UK11 482 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 CD8B2A6NJW9 211 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 DENRO43583 198 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 HYAL3O43820 417 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 F13BP05160 661 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 CD8BP10966 210 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 BSGP35613 385 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 ADH7P40394 386 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 EFNA3P52797 238 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 DUSP5Q16690 384 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 AWAT2Q6E213 333 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 VASNQ6EMK4 673 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 PELI3Q8N2H9 469 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 OR11G2Q8NGC1 345 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms