RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TNFRSF1BP20333 461 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 FPR1P21462 350 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 IDUAP35475 653 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 SLC35A1P78382 337 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 MXRA7P84157 204 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 SLC25A3Q00325 362 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 EGR4Q05215 589 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 RASGEF1BQ0VAM2 473 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 CEACAM7Q14002 265 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 ENTPD8Q5MY95 495 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 DMRTC2Q8IXT2 367 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-201ENST00000340074 PGAM4Q8N0Y7 254 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 RNF148Q8N7C7 305 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 OR6K3Q8NGY3 331 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 RNF217Q8TC41 542 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 SLC38A4Q969I6 547 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 MARVELD3Q96A59 401 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 ZHX1-C8orf76Q96EF9 292 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 TPD52L3Q96J77 140 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 SPOCK3Q9BQ16 436 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 PSD2Q9BQI7 771 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 RBM24Q9BX46 236 aaKnown RBP13.59□□□□□ -0.23
UBE3B-201ENST00000340074 KLHL9Q9P2J3 617 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 KLHL13Q9P2N7 655 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 BAG5Q9UL15 447 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 PROCRQ9UNN8 238 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 SLC9A8Q9Y2E8 581 aa13.59□□□□□ -0.23
UBE3B-201ENST00000340074 CPSF4LA6NMK7 179 aaKnown RBP13.58□□□□□ -0.24
UBE3B-201ENST00000340074 FMO6PO60774 539 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 NPIPB7O75200 414 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 GPIP06744 558 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 YES1P07947 543 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 CD8BP10966 210 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 PNMTP11086 282 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 NCK1P16333 377 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 OR1E2P47887 323 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 CDH12P55289 794 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 H3F3AP84243 136 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 OR7A5Q15622 319 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 TMEM201Q5SNT2 666 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 C1orf140Q5VVS0 124 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 TSPYL5Q86VY4 417 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-201ENST00000340074 CARM1Q86X55 608 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 CCDC103Q8IW40 242 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 ZNF610Q8N9Z0 462 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 STK35Q8TDR2 534 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 SLC47A1Q96FL8 570 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 NSL1Q96IY1 281 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 ZNF300Q96RE9 604 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-201ENST00000340074 C12orf49Q9H741 205 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 BCO1Q9HAY6 547 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 GP6Q9HCN6 339 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 PLSCR4Q9NRQ2 329 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 GALNT8Q9NY28 637 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 SELENONQ9NZV5 590 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 FOXD3Q9UJU5 478 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-201ENST00000340074 ING1Q9UK53 422 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-201ENST00000340074 UNC79Q9P2D8 2635 aa13.58□□□□□ -0.24
UBE3B-201ENST00000340074 A0A087WUJ7 227 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 LIPT2A6NK58 231 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 RAMP1O60894 148 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 CPOXP36551 454 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 RPS5P46782 204 aaKnown RBP13.57□□□□□ -0.24
UBE3B-201ENST00000340074 MNAT1P51948 309 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 SELENOWP63302 87 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 ABLIM2Q6H8Q1 611 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 ZNF613Q6PF04 617 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 ZNF474Q6S9Z5 364 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-201ENST00000340074 C16orf89Q6UX73 402 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 NUFIP2Q7Z417 695 aaKnown RBP13.57□□□□□ -0.24
UBE3B-201ENST00000340074 P3H2Q8IVL5 708 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 DEFB107AQ8IZN7 70 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 FAM156AQ8NDB6 213 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 ADAMTS16Q8TE57 1224 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 ZNF775Q96BV0 537 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-201ENST00000340074 KTI12Q96EK9 354 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-201ENST00000340074 CDRT15Q96T59 188 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 PCDHAC1Q9H158 963 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 ADPRHL2Q9NX46 363 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 EGFL7Q9UHF1 273 aa13.57□□□□□ -0.24
UBE3B-201ENST00000340074 IGKV1D-42A0A075B6H8 117 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 ZNF716A6NP11 495 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 B2RBV5 119 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 EIF1BO60739 113 aaKnown RBP13.56□□□□□ -0.24
UBE3B-201ENST00000340074 AKR7A3O95154 331 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 AHSA1O95433 338 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 THY1P04216 161 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 GGT1P19440 569 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 TCN1P20061 433 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-201ENST00000340074 PTNP21246 168 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 PAQR6Q6TCH4 344 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 PIGXQ8TBF5 258 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 LZICQ8WZA0 190 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 FAM162AQ96A26 154 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 NAA11Q9BSU3 229 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-201ENST00000340074 PTDSS2Q9BVG9 487 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 TAPBPLQ9BX59 468 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 NDE1Q9NXR1 346 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 ITPR2Q14571 2701 aa13.56□□□□□ -0.24
UBE3B-201ENST00000340074 FBN2P35556 2912 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms