RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 SYNPRQ8TBG9 265 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 C1QTNF7Q9BXJ2 289 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 TMEM27Q9HBJ8 222 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 SRA1Q9HD15 236 aaKnown RBP14.86□□□□□ -0.03
SCARB1-202ENST00000339570 LOC100509620A0A075B734 347 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 ATP6V1G2-DDX39BF2Z307 99 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 FGF17O60258 216 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 SPDEFO95238 335 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 GPANK1O95872 356 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 CSN2P05814 226 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 CT62P0C5K7 136 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 ACSM4P0C7M7 580 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 OR8G3PP0DMU2 310 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 DDX6P26196 483 aaKnown RBP eCLIP14.86□□□□□ -0.035e-18■■□□□ 12.4
SCARB1-202ENST00000339570 CCR9P51686 369 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 NOGQ13253 232 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 HTR4Q13639 388 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 COL28A1Q2UY09 1125 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 TMEM69Q5SWH9 247 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 MRM1Q6IN84 353 aaKnown RBP14.86□□□□□ -0.03
SCARB1-202ENST00000339570 BTN2A1Q7KYR7 527 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 MRPL43Q8N983 215 aaKnown RBP14.86□□□□□ -0.03
SCARB1-202ENST00000339570 SLAIN1Q8ND83 568 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 ZDHHC1Q8WTX9 485 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 RBPMSQ93062 196 aaKnown RBP14.86□□□□□ -0.03
SCARB1-202ENST00000339570 ARL6Q9H0F7 186 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 PRDM9Q9NQV7 894 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 PHPT1Q9NRX4 125 aaPredicted RBP14.86□□□□□ -0.03
SCARB1-202ENST00000339570 TBC1D29Q9UFV1 150 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 IKZF2Q9UKS7 526 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 SLC35A3Q9Y2D2 325 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 A0A1B0GVI7 797 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 A0A1B0GWA3 101 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 SLC35G6P0C7Q6 338 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 ZNF542PQ5EBM4 170 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 LNX2Q8N448 690 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 TTLQ8NG68 377 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 OR5M1Q8NGP8 315 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 SRMSQ9H3Y6 488 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 FGF22Q9HCT0 170 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 MED17Q9NVC6 651 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 TAS2R10Q9NYW0 307 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 SCP2D1Q9UJQ7 156 aa14.86□□□□□ -0.03
SCARB1-202ENST00000339570 MEIKINA0A087WXM9 373 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 J3QRE1 110 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 CXCL2P19875 107 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 NRG3P56975 720 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 SIRPAP78324 504 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 LRRC37A5PQ49AS3 106 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 FGD2Q7Z6J4 655 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 PARGQ86W56 976 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 GPALPP1Q8IXQ4 340 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 METTL27Q8N6F8 245 aaPredicted RBP14.85□□□□□ -0.03
SCARB1-202ENST00000339570 LSMEM1Q8N8F7 131 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 RELL2Q8NC24 303 aaPredicted RBP14.85□□□□□ -0.03
SCARB1-202ENST00000339570 TMIEQ8NEW7 156 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 OR56B4Q8NH76 319 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 A0A1W2PQU0 124 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 LINC00862A6NCI5 91 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 H0YC42 278 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 SHOXO15266 292 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 CTSVO60911 334 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 SULT1A3P0DMM9 295 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 SULT1A4P0DMN0 295 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 ERGP11308 486 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 PSMB1P20618 241 aaKnown RBP14.85□□□□□ -0.03
SCARB1-202ENST00000339570 HSD17B2P37059 387 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 PITPNAQ00169 270 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 RIN1Q13671 783 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 ATXN7L3Q14CW9 347 aaPredicted RBP14.85□□□□□ -0.03
SCARB1-202ENST00000339570 FAM78AQ5JUQ0 283 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 ENPP7Q6UWV6 458 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 TMPRSS12Q86WS5 348 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 AHCYL2Q96HN2 611 aaKnown RBP14.85□□□□□ -0.03
SCARB1-202ENST00000339570 HHIPL1Q96JK4 782 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 TRAF4Q9BUZ4 470 aaPredicted RBP14.85□□□□□ -0.03
SCARB1-202ENST00000339570 GSX2Q9BZM3 304 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 FLRT3Q9NZU0 649 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 ACSL5Q9ULC5 683 aa14.85□□□□□ -0.03
SCARB1-202ENST00000339570 PLATP00750 562 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 MYOGP15173 224 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 ACTR1BP42025 376 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 ACTR1AP61163 376 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 TRA2BP62995 288 aaKnown RBP14.84□□□□□ -0.03
SCARB1-202ENST00000339570 EEF1A1P68104 462 aaKnown RBP14.84□□□□□ -0.03
SCARB1-202ENST00000339570 ZIC1Q15915 447 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 BEX5Q5H9J7 111 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 ASPGQ86U10 573 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 SLC35F2Q8IXU6 374 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 NARS2Q96I59 477 aaKnown RBP14.84□□□□□ -0.03
SCARB1-202ENST00000339570 UBL7Q96S82 380 aaPredicted RBP14.84□□□□□ -0.03
SCARB1-202ENST00000339570 TTYH1Q9H313 450 aaPredicted RBP14.84□□□□□ -0.03
SCARB1-202ENST00000339570 DIABLOQ9NR28 239 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 POM121BA6NF01 834 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 APEHP13798 732 aaKnown RBP14.84□□□□□ -0.03
SCARB1-202ENST00000339570 SRMP19623 302 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 NUDT1P36639 197 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 GUCA2AQ02747 115 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 TUSC1Q2TAM9 212 aa14.84□□□□□ -0.03
SCARB1-202ENST00000339570 KIAA1324Q6UXG2 1013 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms