RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SLC35A1P78382 337 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC25A3Q00325 362 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 KRTAP1-1Q07627 177 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC17A1Q14916 467 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 OR7A5Q15622 319 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 EPGNQ6UW88 154 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 CASP12Q6UXS9 341 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 FUNDC1Q8IVP5 155 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 PEX5LQ8IYB4 626 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 KIRREL3Q8IZU9 778 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 PIAS4Q8N2W9 510 aaPredicted RBP11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 C10orf111Q8N326 155 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 KDM8Q8N371 416 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 GLB1L3Q8NCI6 653 aaPredicted RBP11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 PIGXQ8TBF5 258 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 GTF2H4Q92759 462 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 MAL2Q969L2 176 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 DDIT4LQ96D03 193 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 ZHX1-C8orf76Q96EF9 292 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 TMEM19Q96HH6 336 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 MUS81Q96NY9 551 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 TRAF4Q9BUZ4 470 aaPredicted RBP11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 PAIP1Q9H074 479 aaKnown RBP11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 SLCO1B3Q9NPD5 702 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 SDR39U1Q9NRG7 319 aaPredicted RBP11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 ASB6Q9NWX5 421 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 EMC3Q9P0I2 261 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 B3GALT5Q9Y2C3 310 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 PCDHB14Q9Y5E9 798 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 USH1CQ9Y6N9 552 aa11.75□□□□□ -0.53
NUDCD3-201ENST00000338427 HEATR1Q9H583 2144 aaKnown RBP11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 CDHR4A6H8M9 788 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 SLCO1B7G3V0H7 640 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 M0R1B8 84 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 GPR171O14626 319 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 KLF11O14901 512 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 ZNF208O43345 1280 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 CDH2P19022 906 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 CXCR1P25024 350 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 HTR3AP46098 478 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC18A1P54219 525 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 VEZF1Q14119 521 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 C6orf10Q5SRN2 563 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 OTUD3Q5T2D3 398 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 B3GLCTQ6Y288 498 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 SERPINA11Q86U17 422 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 CMIPQ8IY22 773 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 OIT3Q8WWZ8 545 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 PMM1Q92871 262 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 ITCHQ96J02 903 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 EBF4Q9BQW3 602 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 NAA11Q9BSU3 229 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 SLCO5A1Q9H2Y9 848 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 ZIM2Q9NZV7 527 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 UPB1Q9UBR1 384 aa11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 ZNF443Q9Y2A4 671 aaPredicted RBP11.74□□□□□ -0.53
NUDCD3-201ENST00000338427 LIPT2A6NK58 231 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 PDLIM1O00151 329 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 CLIC1O00299 241 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 FAAHO00519 579 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 ZCCHC18P0CG32 403 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 CD40P25942 277 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 IDUAP35475 653 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 IDH3AP50213 366 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 ANXA11P50995 505 aaKnown RBP11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 CDH11P55287 796 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 IRX1P78414 480 aaPredicted RBP11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 GSTA3Q16772 222 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 PAGE3Q5JUK9 113 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 COMTD1Q86VU5 262 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 MSRB3Q8IXL7 192 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 MIER2Q8N344 545 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 TRMT61AQ96FX7 289 aaKnown RBP11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 MDFIQ99750 246 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 USB1Q9BQ65 265 aaKnown RBP11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 REG4Q9BYZ8 158 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 ADPRHL2Q9NX46 363 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 SLC25A37Q9NYZ2 338 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 DSPPQ9NZW4 1301 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 P2RX2Q9UBL9 471 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 ADAM21Q9UKJ8 722 aa11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 NSD1Q96L73 2696 aaPredicted RBP11.73□□□□□ -0.53
NUDCD3-201ENST00000338427 A0A0G2JPF8 293 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 FAM234BA2RU67 622 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 FAM171A2A8MVW0 826 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 HNRNPCL2B2RXH8 293 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 HNRNPCL3B7ZW38 293 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 DNPH1O43598 174 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 SSX4O60224 188 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 GPRIN2O60269 458 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 TPST1O60507 370 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 EIF1BO60739 113 aaKnown RBP11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 HNRNPCL1O60812 293 aaKnown RBP11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 THBS1P07996 1170 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 HNRNPCL4P0DMR1 293 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 HOXB9P17482 250 aaPredicted RBP11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 FKBP2P26885 142 aaKnown RBP11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 P2RY4P51582 365 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 LRRC74AQ0VAA2 488 aa11.72□□□□□ -0.53
NUDCD3-201ENST00000338427 GNA13Q14344 377 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms