RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 RCBTB2O95199 551 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 LYPD3O95274 346 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 TGM6O95932 706 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 H1F0P07305 194 aaKnown RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 IMPDH2P12268 514 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 FPR1P21462 350 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 GTF2E2P29084 291 aaKnown RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 CEACAM8P31997 349 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 OR7A5Q15622 319 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 C1orf146Q5VVC0 180 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 XKRXQ6PP77 449 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 PIWIL3Q7Z3Z3 882 aaKnown RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 ZDHHC21Q8IVQ6 265 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 C10orf67Q8IYJ2 551 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 PIK3C3Q8NEB9 887 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 OR6S1Q8NH40 331 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 MBD3L2Q8NHZ7 208 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 FNDC9Q8TBE3 224 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 ASB5Q8WWX0 329 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 ROBO4Q8WZ75 1007 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 SLC25A36Q96CQ1 311 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 ZFP3Q96NJ6 502 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 RAB3IPQ96QF0 476 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 PIP5K1AQ99755 562 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 KLHL4Q9C0H6 718 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 ANKRD19PQ9H560 264 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 YY1AP1Q9H869 796 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 COQ10BQ9H8M1 238 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 NMNAT1Q9HAN9 279 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 GLRX2Q9NS18 164 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 RHCGQ9UBD6 479 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 CLCF1Q9UBD9 225 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 MED31Q9Y3C7 131 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 SVILO95425 2214 aa10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 RP1L1Q8IWN7 2480 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1-202ENST00000337841 DHRS12A0PJE2 317 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 LIPT2A6NK58 231 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 J3KTA2 159 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 SEMA7AO75326 666 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 PLGP00747 810 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 THY1P04216 161 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 SEMG1P04279 462 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 HIST1H2ABP04908 130 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 CRHP06850 196 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 RAP2AP10114 183 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 HOXB1P14653 301 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 CTSSP25774 331 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 RPS5P46782 204 aaKnown RBP10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 VLDLRP98155 873 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 EGR4Q05215 589 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 RNPS1Q15287 305 aaKnown RBP10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 ZSCAN26Q16670 478 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 FAM69AQ5T7M9 428 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 TMEM225Q6GV28 225 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 SEM1Q6ZVN7 128 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 FCRLAQ7L513 359 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 HIST3H2AQ7L7L0 130 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 TSPYL5Q86VY4 417 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 P3H2Q8IVL5 708 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 NKAIN4Q8IVV8 208 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 CDK20Q8IZL9 346 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 RNF113BQ8IZP6 322 aaKnown RBP10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 OFCC1Q8IZS5 231 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 RPRMLQ8N4K4 120 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 FAM26EQ8N5C1 309 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 C9orf106Q8NAJ2 232 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 TMEM239Q8WW34 195 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 HIST1H2ACQ93077 130 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 TAAR8Q969N4 342 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 MARVELD3Q96A59 401 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 KTI12Q96EK9 354 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 DNAJA3Q96EY1 480 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 CCDC120Q96HB5 630 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 RSRC1Q96IZ7 334 aaKnown RBP10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 PRSS27Q9BQR3 290 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 SRXN1Q9BYN0 137 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 C6orf203Q9P0P8 240 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 AURKCQ9UQB9 309 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 ZNF407Q9C0G0 2248 aa10.66□□□□□ -0.7
SPTLC1-202ENST00000337841 POLEQ07864 2286 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 PCNX3Q9H6A9 2034 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 PRRC2CQ9Y520 2896 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 NCKAP5O14513 1909 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 IGKV1D-42A0A075B6H8 117 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 A0A1W2PRQ8 180 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 FFAR1O14842 300 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 KRT36O76013 467 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 AQP8O94778 261 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 TOXO94900 526 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 DIRAS1O95057 198 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 GADD45GO95257 159 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 MT-ATP6P00846 226 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 TMIGD3P0DMS9 266 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 AGAP20933 346 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 OPRM1P35372 400 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 CTBP2P56545 445 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 RASGEF1BQ0VAM2 473 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 DGCR6Q14129 220 aa10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 ZNF239Q16600 458 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-202ENST00000337841 PAQR6Q6TCH4 344 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms