RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 THY1P04216 161 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 PRKACGP22612 351 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 EVI2BP34910 448 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 MASP1P48740 699 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 RAB25P57735 213 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 FBXW4P57775 412 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 MLF1P58340 268 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 TAS2R41P59536 307 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 HOXC5Q00444 222 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 LAPTM4AQ15012 233 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 TGIF1Q15583 401 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 KDM4DQ6B0I6 523 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF770Q6IQ21 691 aaPredicted RBP11.65□□□□□ -0.55
DDX39A-202ENST00000324340 JMJD6Q6NYC1 403 aaPredicted RBP11.65□□□□□ -0.55
DDX39A-202ENST00000324340 TMEM81Q6P7N7 255 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 ZNF613Q6PF04 617 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 PLEKHM3Q6ZWE6 761 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 RPS19BP1Q86WX3 136 aaKnown RBP11.65□□□□□ -0.55
DDX39A-202ENST00000324340 DND1Q8IYX4 353 aaKnown RBP11.65□□□□□ -0.55
DDX39A-202ENST00000324340 LINC00471Q8N535 108 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 OR10G2Q8NGC3 310 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 OR52J3Q8NH60 311 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 SLC7A13Q8TCU3 470 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 SLC7A6Q92536 515 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 SGCDQ92629 289 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 SPACA9Q96E40 222 aaPredicted RBP11.65□□□□□ -0.55
DDX39A-202ENST00000324340 CRELD1Q96HD1 420 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 CEP19Q96LK0 163 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 PITX2Q99697 317 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 PRR14Q9BWN1 585 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 CDADC1Q9BWV3 514 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 RTN4RQ9BZR6 473 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 LAT2Q9GZY6 243 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 SMURF2Q9HAU4 748 aa11.65□□□□□ -0.55
DDX39A-202ENST00000324340 TMEFF2Q9UIK5 374 aaPredicted RBP11.65□□□□□ -0.55
DDX39A-202ENST00000324340 RIF1Q5UIP0 2472 aaKnown RBP11.64□□□□□ -0.55
DDX39A-202ENST00000324340 NINQ8N4C6 2090 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 TRBV4-1A0A0J9YWV2 114 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 SLC35F4A4IF30 521 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 TRAPPC13A5PLN9 417 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 TRABD2BA6NFA1 517 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 SNTNA6NMZ2 147 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 ERVH48-1M5A8F1 160 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 MASP2O00187 686 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 EIF4E2O60573 245 aaKnown RBP11.64□□□□□ -0.55
DDX39A-202ENST00000324340 CCNB2O95067 398 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 LYPD3O95274 346 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 MT-ND2P03891 347 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 ANXA8P13928 327 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 RNF144AP50876 292 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-202ENST00000324340 DAPP51397 102 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 GAS1P54826 345 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 IL5RAQ01344 420 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 TRAM2Q15035 370 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 SEC23BQ15437 767 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 OR1Q1Q15612 314 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 DCAF10Q5QP82 559 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 DCST1Q5T197 706 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 ANKRD34AQ69YU3 496 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 OPN5Q6U736 354 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 SLC46A3Q7Z3Q1 461 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 GDF7Q7Z4P5 450 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 MISPQ8IVT2 679 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 SLC38A6Q8IZM9 456 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 SLC5A8Q8N695 610 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 C9orf43Q8TAL5 461 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-202ENST00000324340 PHOSPHO1Q8TCT1 267 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 GRHL3Q8TE85 626 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 PSMF1Q92530 271 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 MYDGFQ969H8 173 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 SLC41A3Q96GZ6 507 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 WDFY2Q96P53 400 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 TBL1XR1Q9BZK7 514 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 TRIM2Q9C040 744 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 RACGAP1Q9H0H5 632 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 PAQR5Q9NXK6 330 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-202ENST00000324340 TMCC3Q9ULS5 477 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 RABL2BQ9UNT1 228 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 WASF3Q9UPY6 502 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 RNF6Q9Y252 685 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 NTNG1Q9Y2I2 539 aa11.64□□□□□ -0.55
DDX39A-202ENST00000324340 A0A0B4J2E0 115 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 A0A1B0GX12 115 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 A6NL46 340 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 OIP5O43482 229 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 NOS1APO75052 506 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-202ENST00000324340 CBLP22681 906 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 SOX3P41225 446 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 SSR4P51571 173 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 AIMP2Q13155 320 aaKnown RBP11.63□□□□□ -0.55
DDX39A-202ENST00000324340 NDUFAF6Q330K2 333 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 TBRG1Q3YBR2 411 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 CRTC2Q53ET0 693 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-202ENST00000324340 PODNL1Q6PEZ8 512 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 CBLN3Q6UW01 205 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 MARCH3Q86UD3 253 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 FAM83FQ8NEG4 500 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-202ENST00000324340 NTNG2Q96CW9 530 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 FER1L6-AS2Q96M78 137 aa11.63□□□□□ -0.55
DDX39A-202ENST00000324340 SECISBP2Q96T21 854 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms