RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 OR7G2Q8NG99 324 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 TMEM168Q9H0V1 697 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 SLAMF7Q9NQ25 335 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 SLC2A4RGQ9NR83 387 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 TCRBV21S2A2A0A5A6 115 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 H3BQ06 376 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-201ENST00000323668 ZNF208O43345 1280 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 ITGA5P08648 1049 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 SLC6A9P48067 706 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 MLC1Q15049 377 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 ARHGAP11BQ3KRB8 267 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 BTN2A1Q7KYR7 527 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 IL17RCQ8NAC3 791 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 OR13C3Q8NGS6 347 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 TRIM43Q96BQ3 446 aaPredicted RBP13.65□□□□□ -0.22
TCOF1-201ENST00000323668 PDCD1LG2Q9BQ51 273 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 IL20Q9NYY1 176 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 GSKIPQ9P0R6 139 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 APOBEC3BQ9UH17 382 aaKnown RBP13.65□□□□□ -0.22
TCOF1-201ENST00000323668 SLC6A14Q9UN76 642 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 MEIS3P1A6NDR6 274 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 MEN1O00255 615 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 NFATC4Q14934 902 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 GLB1L2Q8IW92 636 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 NEK7Q8TDX7 302 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 TGM7Q96PF1 710 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 BCL2L14Q9BZR8 327 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 PPA2Q9H2U2 334 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 CPNE7Q9UBL6 633 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 SERTAD3Q9UJW9 196 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 KCND3Q9UK17 655 aa13.65□□□□□ -0.22
TCOF1-201ENST00000323668 DOCK3Q8IZD9 2030 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 PAPPA2Q9BXP8 1791 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 TEX51A0A1B0GUA7 166 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 KDM4EB2RXH2 506 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-201ENST00000323668 UBL4AP11441 157 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 NFYAP23511 347 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-201ENST00000323668 S100A10P60903 97 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF587Q96SQ5 575 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-201ENST00000323668 KLRF1Q9NZS2 232 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 MKL2Q9ULH7 1088 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 CBLCQ9ULV8 474 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 DAPP1Q9UN19 280 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 C19orf53Q9UNZ5 99 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-201ENST00000323668 BRWD3Q6RI45 1802 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 PEX12O00623 359 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 FFAR1O14842 300 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 NARSO43776 548 aaKnown RBP13.64□□□□□ -0.23
TCOF1-201ENST00000323668 PLATP00750 562 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 CBX5P45973 191 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 DUSP8Q13202 625 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 ELOCQ15369 112 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.64□□□□□ -0.238e-7■■□□□ 13.2
TCOF1-201ENST00000323668 HAGHLQ6PII5 290 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-201ENST00000323668 Q6ZSR6 202 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 TTLL10Q6ZVT0 673 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 SPPL3Q8TCT6 385 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 FAM46BQ96A09 425 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 ISG20L2Q9H9L3 353 aaKnown RBP13.64□□□□□ -0.23
TCOF1-201ENST00000323668 CLDND1Q9NY35 253 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 KCNN3Q9UGI6 736 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 PLCL2Q9UPR0 1127 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 A0A0A6YYJ9 748 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 F13BP05160 661 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 SRMP19623 302 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 HTR2AP28223 471 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 METAP1P53582 386 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 DGCR2P98153 550 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 LAIR1Q6GTX8 287 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 WBP2NLQ6ICG8 309 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 CD300LDQ6UXZ3 194 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 MCATQ8IVS2 390 aaKnown RBP13.64□□□□□ -0.23
TCOF1-201ENST00000323668 ZDHHC12Q96GR4 267 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 ST6GAL2Q96JF0 529 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 PCBP4P57723 403 aaKnown RBP13.64□□□□□ -0.23
TCOF1-201ENST00000323668 RBMS2Q15434 407 aaKnown RBP13.64□□□□□ -0.23
TCOF1-201ENST00000323668 Q499Y3 187 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 SLC43A2Q8N370 569 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 GSX2Q9BZM3 304 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 REV1Q9UBZ9 1251 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 SLC6A5Q9Y345 797 aa13.64□□□□□ -0.23
TCOF1-201ENST00000323668 A0A0A6YYD5 115 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 KIR2DS5A0A0G2JLQ3 304 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 A0A0G2JNG1 304 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 A0A1W2PPL8 197 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF736B4DX44 427 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-201ENST00000323668 B8ZZF3 427 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 EEF1E1-BLOC1S5C9J1V9 151 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 KIR2DS3K7RE56 304 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 MAKP20794 623 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 RABIFP47224 123 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 OR10A3P58181 314 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 KIR2DS5Q14953 304 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 NKPD1Q17RQ9 610 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 FAM76BQ5HYJ3 339 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 GPR139Q6DWJ6 353 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 TMEM151BQ8IW70 566 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 HHIPL1Q96JK4 782 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 C20orf85Q9H1P6 137 aa13.63□□□□□ -0.23
TCOF1-201ENST00000323668 CYP8B1Q9UNU6 501 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms