RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SNX33Q8WV41 574 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 KLHL1Q9NR64 748 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 WDR70Q9NW82 654 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 EPHA6Q9UF33 1036 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 SLCO1B1Q9Y6L6 691 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 A0A1W2PRG6 482 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 CHURC1-FNTBB4DL54 471 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 NME1P15531 152 aaKnown RBP20.48■□□□□ 0.87
PNKP-201ENST00000322344 FNTBP49356 437 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 SIRPAP78324 504 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 COL19A1Q14993 1142 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 TIGD3Q6B0B8 471 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 WBP2NLQ6ICG8 309 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 THAP4Q8WY91 577 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 DDOQ99489 341 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 WACQ9BTA9 647 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 NMNAT2Q9BZQ4 307 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 PDE7BQ9NP56 450 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 ABRACLQ9P1F3 81 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 ALG5Q9Y673 324 aa20.48■□□□□ 0.87
PNKP-201ENST00000322344 FITM1A5D6W6 292 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 CLPSP04118 112 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 CCDC92Q53HC0 331 aaPredicted RBP20.47■□□□□ 0.87
PNKP-201ENST00000322344 IL20RBQ6UXL0 311 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 NOXA1Q86UR1 476 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 TCTE3Q8IZS6 198 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 TSTD1Q8NFU3 115 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 PHYHIPQ92561 330 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 CREB3L1Q96BA8 519 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 THAP7Q9BT49 309 aaPredicted RBP20.47■□□□□ 0.87
PNKP-201ENST00000322344 ZCCHC4Q9H5U6 513 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 TMEM165Q9HC07 324 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 RANGRFQ9HD47 186 aaPredicted RBP20.47■□□□□ 0.87
PNKP-201ENST00000322344 UBQLN4Q9NRR5 601 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 SOHLH2Q9NX45 425 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 ADAM18Q9Y3Q7 739 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 CLCA3PQ9Y6N3 262 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 MYO9BQ13459 2157 aa20.47■□□□□ 0.87
PNKP-201ENST00000322344 CACNA1IQ9P0X4 2223 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 TLCD2A6NGC4 264 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 ELOA3DA6NLF2 546 aaPredicted RBP20.46■□□□□ 0.87
PNKP-201ENST00000322344 NOTOA8MTQ0 251 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 SPI1P17947 270 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 S100A1P23297 94 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 CDK10Q15131 360 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 ELOA3BQ3SY89 546 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 RFLNBQ8N5W9 214 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 ELOA3Q8NG57 546 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 LMX1AQ8TE12 382 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 LIPHQ8WWY8 451 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 TRIM63Q969Q1 353 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 EXOSC3Q9NQT5 275 aaKnown RBP20.46■□□□□ 0.87
PNKP-201ENST00000322344 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.46■□□□□ 0.87
PNKP-201ENST00000322344 ANKRD61A6NGH8 418 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 LRRN3E7EW58 273 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 GPRIN2O60269 458 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 RCVRNP35243 200 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 NAA10P41227 235 aaPredicted RBP20.46■□□□□ 0.87
PNKP-201ENST00000322344 GRK6P43250 576 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 HCCSP53701 268 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 GRM7Q14831 915 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 FNDC7Q5VTL7 733 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 UPRTQ96BW1 309 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 RNF170Q96K19 258 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 NMNAT3Q96T66 252 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 LRRN3Q9H3W5 708 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 NCDNQ9UBB6 729 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 SLC6A5Q9Y345 797 aa20.46■□□□□ 0.87
PNKP-201ENST00000322344 IGHV1OR15-9A0A0B4J2B8 117 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 OR2W5A6NFC9 320 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 C17orf105B2RV13 164 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 FLRT2O43155 660 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 IL33O95760 270 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 UCHL1P09936 223 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 HPGDP15428 266 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 CD27P26842 260 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 CD1CP29017 333 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 BTG1P62324 171 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 SLC25A35Q3KQZ1 300 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 BICRALQ6AI39 1079 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 OVCH1Q7RTY7 1134 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 OR51L1Q8NGJ5 315 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 GDF15Q99988 308 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 RPRD1BQ9NQG5 326 aaKnown RBP20.45■□□□□ 0.86
PNKP-201ENST00000322344 MMACHCQ9Y4U1 282 aa20.45■□□□□ 0.86
PNKP-201ENST00000322344 IGKV1D-42A0A075B6H8 117 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 FZD7O75084 574 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 UBL4AP11441 157 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 APEHP13798 732 aaKnown RBP20.44■□□□□ 0.86
PNKP-201ENST00000322344 CD38P28907 300 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 PPICP45877 212 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 GPR176Q14439 515 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 MED25Q71SY5 747 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 GLCCI1Q86VQ1 547 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 C17orf82Q86X59 251 aaPredicted RBP20.44■□□□□ 0.86
PNKP-201ENST00000322344 METTL27Q8N6F8 245 aaPredicted RBP20.44■□□□□ 0.86
PNKP-201ENST00000322344 ZSCAN1Q8NBB4 408 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 OR13C5Q8NGS8 318 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 RLN3Q8WXF3 142 aa20.44■□□□□ 0.86
PNKP-201ENST00000322344 HSPA12BQ96MM6 686 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms