RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 NEIL2Q969S2 332 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 C4orf47A7E2U8 309 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 PRKNO60260 465 aaPredicted RBP12.93□□□□□ -0.34
EDEM3-201ENST00000318130 LILRB3O75022 631 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 LILRB5O75023 590 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 MED6O75586 246 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 TNFSF4P23510 183 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 PRPS1P60891 318 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 HAS2Q92819 552 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 MUCL1Q96DR8 90 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 INSM2Q96T92 566 aaPredicted RBP12.93□□□□□ -0.34
EDEM3-201ENST00000318130 CENPOQ9BU64 300 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 ZNF160Q9HCG1 818 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 MARCH5Q9NX47 278 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 A0A1W2PS29 197 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 NPC1O15118 1278 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 HLA-AP01891 365 aaKnown RBP12.93□□□□□ -0.34
EDEM3-201ENST00000318130 FUT1P19526 365 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 MMP12P39900 470 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 LEXMQ3ZCV2 418 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 RETREG3Q86VR2 466 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 OR1S1Q8NH92 325 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 DTD2Q96FN9 168 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 MS4A4EQ96PG1 132 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 TRIB1Q96RU8 372 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 CLMPQ9H6B4 373 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 TMEM9BQ9NQ34 198 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 TESQ9UGI8 421 aaKnown RBP12.93□□□□□ -0.34
EDEM3-201ENST00000318130 FBXL2Q9UKC9 423 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 E9PI62 339 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 DDCP20711 480 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 PCSK6P29122 969 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 MPP7Q5T2T1 576 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 PLCXD3Q63HM9 321 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 DMRT3Q9NQL9 472 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 TAS2R16Q9NYV7 291 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 A0A1B0GTW7 788 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 GAPDHSO14556 408 aaPredicted RBP12.93□□□□□ -0.34
EDEM3-201ENST00000318130 ACP2P11117 423 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 PPP3CBP16298 524 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 DCDP81605 110 aaKnown RBP12.93□□□□□ -0.34
EDEM3-201ENST00000318130 SF3B4Q15427 424 aaKnown RBP eCLIP12.93□□□□□ -0.341e-6■□□□□ 8.2
EDEM3-201ENST00000318130 PIANPQ8IYJ0 282 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 DNAJC22Q8N4W6 341 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 DUSP19Q8WTR2 217 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 IL1F10Q8WWZ1 152 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 TCEAL2Q9H3H9 227 aaPredicted RBP12.93□□□□□ -0.34
EDEM3-201ENST00000318130 GLTPQ9NZD2 209 aa12.93□□□□□ -0.34
EDEM3-201ENST00000318130 FBXO24O75426 580 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 HOXB9P17482 250 aaPredicted RBP12.92□□□□□ -0.34
EDEM3-201ENST00000318130 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
EDEM3-201ENST00000318130 DAPP51397 102 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 CLDN10P78369 228 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 DBPQ10586 325 aaPredicted RBP12.92□□□□□ -0.34
EDEM3-201ENST00000318130 MEF2DQ14814 521 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 SLC38A1Q9H2H9 487 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 IL26Q9NPH9 171 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 TMEM100Q9NV29 134 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 ANTXRLA6NF34 631 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 UGDHO60701 494 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 ITGBL1O95965 494 aaPredicted RBP12.92□□□□□ -0.34
EDEM3-201ENST00000318130 RPS25P62851 125 aaKnown RBP12.92□□□□□ -0.34
EDEM3-201ENST00000318130 C19orf47Q8N9M1 422 aaKnown RBP12.92□□□□□ -0.34
EDEM3-201ENST00000318130 EGLN2Q96KS0 407 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 CDX2Q99626 313 aaPredicted RBP12.92□□□□□ -0.34
EDEM3-201ENST00000318130 ACKR4Q9NPB9 350 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 ECM29Q5VYK3 1845 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 ANKRD34BA5PLL1 514 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 HSBP1L1C9JCN9 74 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 PTHP01270 115 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 HTR3DQ70Z44 454 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 GAREM2Q75VX8 874 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 KLHDC9Q8NEP7 349 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 SPIN2AQ99865 258 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 SPIN2BQ9BPZ2 258 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 OR52D1Q9H346 318 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 PLCXD1Q9NUJ7 323 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 GFOD1Q9NXC2 390 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 HSFX1Q9UBD0 423 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 NUMA1Q14980 2115 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 STMND1H3BQB6 276 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 TGM6O95932 706 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 AGFG1P52594 562 aaKnown RBP12.92□□□□□ -0.34
EDEM3-201ENST00000318130 ARL6IP1Q15041 203 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 RPE65Q16518 533 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 GPR155Q7Z3F1 870 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 ENTHD1Q8IYW4 607 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 SCCPDHQ8NBX0 429 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 PIGCQ92535 297 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 TREX1Q9NSU2 369 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 MYH15Q9Y2K3 1946 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 NRXN3Q9Y4C0 1643 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 KRBOX1C9JBD0 128 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 EIF3FO00303 357 aaPredicted RBP12.92□□□□□ -0.34
EDEM3-201ENST00000318130 IL9P15248 144 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 RAB3AP20336 220 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 RRAS2P62070 204 aaPredicted RBP12.92□□□□□ -0.34
EDEM3-201ENST00000318130 OR56B4Q8NH76 319 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 C8orf44Q96CB5 159 aa12.92□□□□□ -0.34
EDEM3-201ENST00000318130 C1QTNF2Q9BXJ5 285 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms