RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 GFRA1P56159 465 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 SELENBP1Q13228 472 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 PCSK4Q6UW60 755 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 FAM180AQ6UWF9 173 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 IZUMO2Q6UXV1 221 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 Q6ZPB1 254 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 KDM8Q8N371 416 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 KLHL4Q9C0H6 718 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 ANKRD19PQ9H560 264 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 EGLN3Q9H6Z9 239 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF556Q9HAH1 456 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 KRT84Q9NSB2 600 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 SPRR3Q9UBC9 169 aa13.87□□□□□ -0.19
PDLIM5-202ENST00000318007 BLOC1S5-TXNDC5H3BN57 136 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 H3BN98 237 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 CASQ2O14958 399 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 SNAP29O95721 258 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 EIF1AXP47813 144 aaKnown RBP13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 PPP2R2BQ00005 443 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 LTBQ06643 244 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 DAG1Q14118 895 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 SLC25A53Q5H9E4 307 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 CLEC12AQ5QGZ9 265 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 IGFN1Q86VF2 1251 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 PTDSS2Q9BVG9 487 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 ADNPQ9H2P0 1102 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 RIBC2Q9H4K1 309 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 ZDHHC11Q9H8X9 412 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 HHATLQ9HCP6 504 aa13.86□□□□□ -0.19
PDLIM5-202ENST00000318007 EFCAB9A8MZ26 197 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 NPIPA2E9PIF3 369 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 NPIPA3F8WFD2 350 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 AHSA1O95433 338 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 ALPLP05186 524 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 IMPDH2P12268 514 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF17P17021 662 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF26P17031 533 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 BMP7P18075 431 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 ADH6P28332 368 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 EPHA2P29317 976 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 RBM34P42696 430 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 MLLT10P55197 1068 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 NFATC3Q12968 1075 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 HYAL4Q2M3T9 481 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 TMEM44Q2T9K0 475 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 KLHL17Q6TDP4 642 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 OAFQ86UD1 273 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 CDK20Q8IZL9 346 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 OR5M9Q8NGP3 310 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 SGTBQ96EQ0 304 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF845Q96IR2 970 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 HS6ST2Q96MM7 605 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 RBM4BQ9BQ04 359 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 RBM4Q9BWF3 364 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 OSBPL10Q9BXB5 764 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 NANSQ9NR45 359 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 TMEFF2Q9UIK5 374 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 TUBD1Q9UJT1 453 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 ZFYVE26Q68DK2 2539 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 A0A0J9YW62 118 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 A0A1B0GTH9 108 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 TTLL8A6PVC2 850 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 C11orf98E9PRG8 122 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 ETV2O00321 342 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 AKR7A3O95154 331 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 DIO1P49895 249 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 ALDH3A2P51648 485 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 PRKCDQ05655 676 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 ZNF74Q16587 644 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 SLC36A3Q495N2 470 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 SLC46A3Q7Z3Q1 461 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 NEIL3Q8TAT5 605 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 ABTB1Q969K4 478 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 SNRNP40Q96DI7 357 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 TMEM43Q9BTV4 400 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 PLA2G12AQ9BZM1 189 aa13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 KRCC1Q9NPI7 259 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 PAPOLBQ9NRJ5 636 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-202ENST00000318007 TRAV36DV7A0A075B6V5 113 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 C7orf72A4D263 438 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 ERVH48-1M5A8F1 160 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 SULT2B1O00204 365 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 PLGP00747 810 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 AHCYP23526 432 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 GTF2E2P29084 291 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 IDUAP35475 653 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 IFNGR2P38484 337 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 OR2B6P58173 313 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 RAC1P63000 192 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 FOXK2Q01167 660 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 DBPQ10586 325 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 FAM69AQ5T7M9 428 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 TMEM236Q5W0B7 351 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 C1orf94Q6P1W5 598 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 GGNQ86UU5 652 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 IQCF1Q8N6M8 205 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 KLHL15Q96M94 604 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 C12orf10Q9HB07 376 aa13.84□□□□□ -0.19
PDLIM5-202ENST00000318007 ASF1BQ9NVP2 202 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms