RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TMEM19Q96HH6 336 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 SPATA9Q9BWV2 254 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 TAPBPLQ9BX59 468 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 FAIMQ9NVQ4 179 aa15.67■□□□□ 0.1
TPM1-203ENST00000317516 ZNF443Q9Y2A4 671 aaPredicted RBP15.67■□□□□ 0.1
TPM1-203ENST00000317516 A0A096LPI6 279 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 A0A1W2PP18 115 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 A8MVM7 634 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 C5orf58C9J3I9 102 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 RAD51DO75771 328 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 HEXAP06865 529 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 HOXB4P17483 251 aaPredicted RBP15.66■□□□□ 0.1
TPM1-203ENST00000317516 ACAA2P42765 397 aaKnown RBP15.66■□□□□ 0.1
TPM1-203ENST00000317516 IRX1P78414 480 aaPredicted RBP15.66■□□□□ 0.1
TPM1-203ENST00000317516 TGFBR3Q03167 851 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 FAPQ12884 760 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 CEACAM7Q14002 265 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 SLC17A1Q14916 467 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 GTDC1Q4AE62 458 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 ZNF311Q5JNZ3 666 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 OTUD3Q5T2D3 398 aaPredicted RBP15.66■□□□□ 0.1
TPM1-203ENST00000317516 KLHL17Q6TDP4 642 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 TMEM108Q6UXF1 575 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 CASP12Q6UXS9 341 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 GOLGA6L1Q8N7Z2 621 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 DYDC1Q8WWB3 177 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 ATP6V1G3Q96LB4 118 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 CCDC28BQ9BUN5 200 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 SF3B5Q9BWJ5 86 aaKnown RBP15.66■□□□□ 0.1
TPM1-203ENST00000317516 PAIP1Q9H074 479 aaKnown RBP15.66■□□□□ 0.1
TPM1-203ENST00000317516 PIF1Q9H611 641 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 BCL2L10Q9HD36 194 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 A4GALTQ9NPC4 353 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 CISD1Q9NZ45 108 aaKnown RBP15.66■□□□□ 0.1
TPM1-203ENST00000317516 MALT1Q9UDY8 824 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 MGAT4BQ9UQ53 548 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 FLVCR1Q9Y5Y0 555 aa15.66■□□□□ 0.1
TPM1-203ENST00000317516 NIPBLQ6KC79 2804 aaeCLIP15.65■□□□□ 0.1
TPM1-203ENST00000317516 ZC3H12DA2A288 527 aaKnown RBP15.65■□□□□ 0.1
TPM1-203ENST00000317516 RAMP1O60894 148 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 DANCRP0C864 163 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 PPIBP23284 216 aaKnown RBP15.65■□□□□ 0.1
TPM1-203ENST00000317516 IDH3AP50213 366 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 OR7A5Q15622 319 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 ETFDHQ16134 617 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 C1QTNF12Q5T7M4 302 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 TMEM225Q6GV28 225 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 SLC2A7Q6PXP3 512 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 SEZ6L2Q6UXD5 910 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 Q71RC1 249 aaPredicted RBP15.65■□□□□ 0.1
TPM1-203ENST00000317516 DEPDC4Q8N2C3 294 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 CLIP4Q8N3C7 705 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 BBS10Q8TAM1 723 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 SLC35B4Q969S0 331 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 MUS81Q96NY9 551 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 TRIM2Q9C040 744 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 ALG2Q9H553 416 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 TMEM45AQ9NWC5 275 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 DSCAMO60469 2012 aa15.65■□□□□ 0.1
TPM1-203ENST00000317516 TRIM64A6NGJ6 449 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 TRIM64BA6NI03 449 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 LIPT2A6NK58 231 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 OVOL3O00110 214 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 SMAD7O15105 426 aaKnown RBP15.64■□□□□ 0.09
TPM1-203ENST00000317516 VAMP5O95183 116 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 SOD3P08294 240 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 BMP2P12643 396 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 PTAFRP25105 342 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 NTF4P34130 210 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 RPS26P11Q5JNZ5 115 aaPredicted RBP15.64■□□□□ 0.09
TPM1-203ENST00000317516 BLOC1S3Q6QNY0 202 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 ABHD12BQ7Z5M8 362 aaPredicted RBP15.64■□□□□ 0.09
TPM1-203ENST00000317516 ATG4DQ86TL0 474 aaPredicted RBP15.64■□□□□ 0.09
TPM1-203ENST00000317516 CIARTQ8N365 385 aaPredicted RBP15.64■□□□□ 0.09
TPM1-203ENST00000317516 KBTBD8Q8NFY9 601 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 OR52N5Q8NH56 324 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 TMEM45BQ96B21 275 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 SPDL1Q96EA4 605 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 SLCO1B3Q9NPD5 702 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 CCDC167Q9P0B6 97 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 DCTN4Q9UJW0 460 aa15.64■□□□□ 0.09
TPM1-203ENST00000317516 ABCD4O14678 606 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 AKR7A3O95154 331 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 LY6G6DO95868 133 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 ETS2P15036 469 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 AQP5P55064 265 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 GABRA6Q16445 453 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 AAED1Q7RTV5 226 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 GPAT4Q86UL3 456 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 KRT73Q86Y46 540 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 PIAS4Q8N2W9 510 aaPredicted RBP15.63■□□□□ 0.09
TPM1-203ENST00000317516 C17orf78Q8N4C9 275 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 TMEM99Q8N816 258 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 POMGNT2Q8NAT1 580 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 C1orf162Q8NEQ5 155 aaPredicted RBP15.63■□□□□ 0.09
TPM1-203ENST00000317516 OR52E4Q8NGH9 312 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 STK35Q8TDR2 534 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 NEUROG1Q92886 237 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 SPATA5L1Q9BVQ7 753 aa15.63■□□□□ 0.09
TPM1-203ENST00000317516 GRIP2Q9C0E4 1043 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms