RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 EIF2B5Q13144 721 aaKnown RBP7.11□□□□□ -1.27
CNOT4-201ENST00000315544 TRAM2Q15035 370 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 OR1Q1Q15612 314 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 RFPL4BQ6ZWI9 263 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF527Q8NB42 609 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 CCL4L1Q8NHW4 92 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 SMAP2Q8WU79 429 aaPredicted RBP7.11□□□□□ -1.27
CNOT4-201ENST00000315544 OR1E3Q8WZA6 343 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 FAIM2Q9BWQ8 316 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 OR52D1Q9H346 318 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 WDR26Q9H7D7 661 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 MTHFD2LQ9H903 347 aaPredicted RBP7.11□□□□□ -1.27
CNOT4-201ENST00000315544 MOKQ9UQ07 419 aa7.11□□□□□ -1.27
CNOT4-201ENST00000315544 OR4C45A6NMZ5 311 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 CRCPO75575 148 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 SAGP10523 405 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 CPMP14384 443 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 NKAIN2Q5VXU1 208 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 CBLN3Q6UW01 205 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 C16orf62Q7Z3J2 963 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 JPH3Q8WXH2 748 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 TMEM159Q96B96 161 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 TMEM168Q9H0V1 697 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 HIPK2Q9H2X6 1198 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 NARFLQ9H6Q4 476 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 MRPL22Q9NWU5 206 aaKnown RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 SLC2A8Q9NY64 477 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 NLGN3Q9NZ94 848 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 VSX1Q9NZR4 365 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 OR5V1Q9UGF6 321 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 OR1A2Q9Y585 309 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 GXYLT2A0PJZ3 443 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 TUBAL3A6NHL2 446 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 MCIDASD6RGH6 385 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 TERTO14746 1132 aaKnown RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 SLC19A2O60779 497 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 BGLAPP02818 100 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 UBL4AP11441 157 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 NTSR1P30989 418 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 OR3A3P47888 321 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 SRP9P49458 86 aaKnown RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 DGCR2P98153 550 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 SRSF5Q13243 272 aaKnown RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 FAM214AQ32MH5 1076 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF385CQ66K41 422 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 RPTNQ6XPR3 784 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 FOXL2NBQ6ZUU3 175 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 BTN2A1Q7KYR7 527 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 AMZ2Q86W34 360 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF619Q8N2I2 560 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF655Q8N720 491 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 TTLQ8NG68 377 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 C3orf49Q96BT1 292 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 RADILQ96JH8 1075 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 KCTD7Q96MP8 289 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 AMELYQ99218 206 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 C17orf62Q9BQA9 187 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 ALX4Q9H161 411 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 MED20Q9H944 212 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 LYARQ9NX58 379 aaKnown RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 POM121BA6NF01 834 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 NPIPB13A6NJU9 1138 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 SLC9B1P1A6NJY1 282 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 NPIPB4C9JG80 1138 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 CDK2AP1O14519 115 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 CHST10O43529 356 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 HIST1H2AGP0C0S8 130 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 CD59P13987 128 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 HIST1H2ADP20671 130 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 CDKN2AP42771 156 aaKnown RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 MED22Q15528 200 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 NRMQ8IXM6 262 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 CLEC1AQ8NC01 280 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 NSMAFQ92636 917 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 OSTF1Q92882 214 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 HIST1H2AHQ96KK5 128 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 HIST1H2AJQ99878 128 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 H2AFJQ9BTM1 129 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 SNTG1Q9NSN8 517 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 PAQR5Q9NXK6 330 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-201ENST00000315544 PTTG3PQ9NZH4 202 aa7.1□□□□□ -1.27
CNOT4-201ENST00000315544 BRWD1Q9NSI6 2320 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 A0A1W2PQ72 361 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 PMS2P1A4D2B8 440 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 TNFRSF10CO14798 259 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 B3GALNT1O75752 331 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 DDAH2O95865 285 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 TMIGD3P0DMS9 266 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-201ENST00000315544 C5AR1P21730 350 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 MAP2K3P46734 347 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 DIO1P49895 249 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 MESTQ5EB52 335 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 MRPL2Q5T653 305 aaKnown RBP7.09□□□□□ -1.27
CNOT4-201ENST00000315544 B3GNTL1Q67FW5 361 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-201ENST00000315544 OR7E24Q6IFN5 339 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 KIRREL2Q6UWL6 708 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 B3GLCTQ6Y288 498 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 TMPRSS11AQ6ZMR5 421 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 IDO2Q6ZQW0 420 aa7.09□□□□□ -1.27
CNOT4-201ENST00000315544 LINGO2Q7L985 606 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms