RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 EPCAMP16422 314 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 TYRP1P17643 537 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 HCCSP53701 268 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 PNLIPRP1P54315 467 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 TSC22D1Q15714 1073 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 POM121L1PQ3SYA9 428 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 TP53I3Q53FA7 332 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 C9orf50Q5SZB4 431 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 HENMT1Q5T8I9 393 aaKnown RBP16.65■□□□□ 0.26
SPSB4-201ENST00000310546 H3F3CQ6NXT2 135 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 C5orf46Q6UWT4 87 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 DCAF4L2Q8NA75 395 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 TM4SF18Q96CE8 201 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 SLC46A2Q9BY10 475 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 SNAPINO95295 136 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 P2RX1P51575 399 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 TAS2R43P59537 309 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 PDZK1IP1Q13113 114 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 C4orf46Q504U0 113 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 DMKNQ6E0U4 476 aaPredicted RBP16.65■□□□□ 0.26
SPSB4-201ENST00000310546 CORO6Q6QEF8 472 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 SSX6Q7RTT6 188 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 CMTM8Q8IZV2 173 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 DIO2Q92813 273 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 SLC25A38Q96DW6 304 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 CAMK1GQ96NX5 476 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 C19orf43Q9BQ61 176 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 B4GALT6Q9UBX8 382 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 MIOXQ9UGB7 285 aa16.65■□□□□ 0.26
SPSB4-201ENST00000310546 COL6A3P12111 3177 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 A0A0G2JN53 185 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 CD53P19397 219 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 BDKRB2P30411 391 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 RPS15P62841 145 aaKnown RBP16.64■□□□□ 0.25
SPSB4-201ENST00000310546 CBFBQ13951 182 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 KRT33BQ14525 404 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 OR2W3Q7Z3T1 314 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 C11orf96Q7Z7L8 435 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 LILRB2Q8N423 598 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 RFLNBQ8N5W9 214 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 CYB561A3Q8NBI2 242 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
SPSB4-201ENST00000310546 ACOT11Q8WXI4 607 aaPredicted RBP16.64■□□□□ 0.25
SPSB4-201ENST00000310546 ALG14Q96F25 216 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 MRPL48Q96GC5 212 aaKnown RBP16.64■□□□□ 0.25
SPSB4-201ENST00000310546 PEX11GQ96HA9 241 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 MNTQ99583 582 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 TEAD3Q99594 435 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 PDCD1LG2Q9BQ51 273 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 ZBP1Q9H171 429 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 CACYBPQ9HB71 228 aaKnown RBP16.64■□□□□ 0.25
SPSB4-201ENST00000310546 ZDHHC4Q9NPG8 344 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 FBXL4Q9UKA2 621 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 INSL6Q9Y581 213 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 PLXNB3Q9ULL4 1909 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 TMEM272A0A1B0GTI8 110 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 PTH2RP49190 550 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 LRRC37A5PQ49AS3 106 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 TCEAL8Q8IYN2 117 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 LYSMD1Q96S90 227 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 DHCR7Q9UBM7 475 aaKnown RBP16.64■□□□□ 0.25
SPSB4-201ENST00000310546 EPHA6Q9UF33 1036 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 ZNF230Q9UIE0 474 aaPredicted RBP16.64■□□□□ 0.25
SPSB4-201ENST00000310546 PCOLCE2Q9UKZ9 415 aa16.64■□□□□ 0.25
SPSB4-201ENST00000310546 KANTRA0A1W2PQU2 76 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 MEX3AA1L020 520 aaKnown RBP16.63■□□□□ 0.25
SPSB4-201ENST00000310546 LRIT2A6NDA9 550 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 CCDC85CA6NKD9 419 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 TTLL8A6PVC2 850 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 SLC25A12O75746 678 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 SMIM6P0DI80 62 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 CTSAP10619 480 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 NT5EP21589 574 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 FUT5Q11128 374 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 ATXN7L3Q14CW9 347 aaPredicted RBP16.63■□□□□ 0.25
SPSB4-201ENST00000310546 SUN3Q8TAQ9 357 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 SYNPRQ8TBG9 265 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 KISS1RQ969F8 398 aaPredicted RBP16.63■□□□□ 0.25
SPSB4-201ENST00000310546 S100A16Q96FQ6 103 aaKnown RBP16.63■□□□□ 0.25
SPSB4-201ENST00000310546 TLNRD1Q9H1K6 362 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 CCDC86Q9H6F5 360 aaKnown RBP16.63■□□□□ 0.25
SPSB4-201ENST00000310546 ZDHHC6Q9H6R6 413 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 KCNE3Q9Y6H6 103 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 OBSL1O75147 1896 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 KNL1Q8NG31 2342 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 GLOD5A6NK44 160 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 EIF4E2O60573 245 aaKnown RBP16.63■□□□□ 0.25
SPSB4-201ENST00000310546 ZGLP1P0C6A0 271 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 MAPK3P27361 379 aaPredicted RBP16.63■□□□□ 0.25
SPSB4-201ENST00000310546 PCBP4P57723 403 aaKnown RBP16.63■□□□□ 0.25
SPSB4-201ENST00000310546 ZNF85Q03923 595 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 IL10RAQ13651 578 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 SNTB1Q13884 538 aaKnown RBP16.63■□□□□ 0.25
SPSB4-201ENST00000310546 NDUFAF6Q330K2 333 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 OLFML2AQ68BL7 652 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 TMEM71Q6P5X7 295 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 NXPE4Q6UWF7 544 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 Q6ZVL8 140 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 OR2AP1Q8NGE2 309 aa16.63■□□□□ 0.25
SPSB4-201ENST00000310546 DPH1Q9BZG8 443 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms