RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 KCNRGQ8N5I3 272 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 DMRT3Q9NQL9 472 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 MOKQ9UQ07 419 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 CER1O95813 267 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.5□□□□□ -0.09
HCFC1-201ENST00000310441 NETO1Q8TDF5 533 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 ST7LQ8TDW4 575 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 LRFN5Q96NI6 719 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 ATXN7L1Q9ULK2 861 aaPredicted RBP14.5□□□□□ -0.09
HCFC1-201ENST00000310441 XKRY2A2RUG3 117 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 FZD7O75084 574 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 ISG20Q96AZ6 181 aaKnown RBP14.5□□□□□ -0.09
HCFC1-201ENST00000310441 RASD1Q9Y272 281 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 AKAP6Q13023 2319 aa14.5□□□□□ -0.09
HCFC1-201ENST00000310441 EMP2P54851 167 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 RANP62826 216 aaKnown RBP14.49□□□□□ -0.09
HCFC1-201ENST00000310441 LCN10Q6JVE6 187 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 OR4Q3Q8NH05 313 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 OR14A16Q8NHC5 309 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 TMEM200CA6NKL6 621 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 FOLR1P15328 257 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 FUT1P19526 365 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 RELAQ04206 551 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 ZMYND19Q96E35 227 aaPredicted RBP14.49□□□□□ -0.09
HCFC1-201ENST00000310441 MMP28Q9H239 520 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 WASH6PQ9NQA3 447 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 DRD1P21728 446 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 DPP4P27487 766 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 TRHRP34981 398 aaPredicted RBP14.49□□□□□ -0.09
HCFC1-201ENST00000310441 NAT6Q93015 286 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 FUBP1Q96AE4 644 aaKnown RBP14.49□□□□□ -0.09
HCFC1-201ENST00000310441 RAB3CQ96E17 227 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 SLC6A18Q96N87 628 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 CDCA3Q99618 268 aaPredicted RBP14.49□□□□□ -0.09
HCFC1-201ENST00000310441 PIGMQ9H3S5 423 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 DYNLRB1Q9NP97 96 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 H3BML4 177 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 SEMA4FO95754 770 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 CBX7O95931 251 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 PTBP1P26599 531 aaKnown RBP eCLIP14.49□□□□□ -0.09
HCFC1-201ENST00000310441 TNK1Q13470 666 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 GLYR1Q49A26 553 aaPredicted RBP14.49□□□□□ -0.09
HCFC1-201ENST00000310441 MMP21Q8N119 569 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 CNIH4Q9P003 139 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 ITGB7P26010 798 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 HLA-DMAP28067 261 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 NLRP8Q86W28 1048 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 OR2T27Q8NH04 317 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 IGSF21Q96ID5 467 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 UBQLN4Q9NRR5 601 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 GALR3O60755 368 aaPredicted RBP14.49□□□□□ -0.09
HCFC1-201ENST00000310441 CT45A10P0DMU9 189 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 VIPR2P41587 438 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 SH3BP2P78314 561 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 CRTC1Q6UUV9 634 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 DNAJC15Q9Y5T4 150 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 IER3IP1Q9Y5U9 82 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 DOCK9Q9BZ29 2069 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 PRAMEF26H0Y7S4 382 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 TGOLN2O43493 480 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 CHRM4P08173 479 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 OR8U8P0C7N1 319 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 CD46P15529 392 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 RRADP55042 308 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 ZNF280AP59817 542 aaPredicted RBP14.49□□□□□ -0.09
HCFC1-201ENST00000310441 TAGLNQ01995 201 aaKnown RBP14.49□□□□□ -0.09
HCFC1-201ENST00000310441 OR52B6Q8NGF0 335 aa14.49□□□□□ -0.09
HCFC1-201ENST00000310441 MT-ND4P03905 459 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 F2RP25116 425 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 HOXD11P31277 338 aaPredicted RBP14.48□□□□□ -0.09
HCFC1-201ENST00000310441 OR4D1Q15615 310 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 CDONQ4KMG0 1287 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 CATSPERDQ86XM0 798 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 LILRB4Q8NHJ6 448 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 C1orf198Q9H425 327 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 YARS2Q9Y2Z4 477 aaKnown RBP14.48□□□□□ -0.09
HCFC1-201ENST00000310441 LAMP1P11279 417 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 CD53P19397 219 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 OR7A5Q15622 319 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 IGDCC3Q8IVU1 814 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 FIBINQ8TAL6 211 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 TFAP2CQ92754 450 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 PSD2Q9BQI7 771 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 IDUAP35475 653 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 SSX9Q7RTT3 188 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 FAM217AQ8IXS0 508 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 ALOXE3Q9BYJ1 711 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 CHEK1O14757 476 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 BAXQ07812 192 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 ZNF443Q9Y2A4 671 aaPredicted RBP14.48□□□□□ -0.09
HCFC1-201ENST00000310441 N4BP2Q86UW6 1770 aaPredicted RBP14.48□□□□□ -0.09
HCFC1-201ENST00000310441 NPIPA5A0A0B4J1W7 369 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 SLC43A1O75387 559 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 UBL3O95164 117 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 RPS27LQ71UM5 84 aaKnown RBP14.48□□□□□ -0.09
HCFC1-201ENST00000310441 KDM8Q8N371 416 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 PXT1Q8NFP0 134 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 CCNL2Q96S94 520 aaPredicted RBP14.48□□□□□ -0.09
HCFC1-201ENST00000310441 F2P00734 622 aa14.48□□□□□ -0.09
HCFC1-201ENST00000310441 DBHP09172 617 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms