RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 SAR1AQ9NR31 198 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 SACM1LQ9NTJ5 587 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 CCDC167Q9P0B6 97 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 MGAT4CQ9UBM8 478 aa7.52□□□□□ -1.2
CHD6-201ENST00000309279 GPR55Q9Y2T6 319 aaPredicted RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 YARS2Q9Y2Z4 477 aaKnown RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 HEMK1Q9Y5R4 338 aaPredicted RBP7.52□□□□□ -1.2
CHD6-201ENST00000309279 COL6A6A6NMZ7 2263 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 CFAP46Q8IYW2 2715 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 EXPH5Q8NEV8 1989 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 HELTA6NFD8 242 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 OOEPA6NGQ2 149 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 CENPBD1B2RD01 187 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 NR5A2O00482 541 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 AIM2O14862 343 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 SEC14L5O43304 696 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 EMC8O43402 210 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 ZNF354AO60765 605 aaPredicted RBP7.52□□□□□ -1.21
CHD6-201ENST00000309279 ITGA10O75578 1167 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 OR2J2O76002 312 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 AHSA1O95433 338 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 WDPCPO95876 746 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 CT45A8P0DMV1 189 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 CT45A9P0DMV2 189 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 CD1EP15812 388 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 RAB4AP20338 218 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 MYF6P23409 242 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 MAP3K8P41279 467 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 PPICP45877 212 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 FHITP49789 147 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 PRR5P85299 388 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 PDZK1IP1Q13113 114 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 CT45A2Q5DJT8 189 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 NHLRC1Q6VVB1 395 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 ETV3LQ6ZN32 361 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 C16orf47Q6ZP98 133 aaPredicted RBP7.52□□□□□ -1.21
CHD6-201ENST00000309279 ANKRD46Q86W74 232 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 CLECL1Q8IZS7 167 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 BEST3Q8N1M1 668 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 NUP43Q8NFH3 380 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 C9orf43Q8TAL5 461 aaPredicted RBP7.52□□□□□ -1.21
CHD6-201ENST00000309279 TM9SF4Q92544 642 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 RAB24Q969Q5 203 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 MOAP1Q96BY2 351 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 BTBD9Q96Q07 612 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 RASL10BQ96S79 203 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 CCT8L2Q96SF2 557 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 CITED1Q99966 193 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 ZNF416Q9BWM5 594 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 OR51B6Q9H340 312 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 SP140LQ9H930 580 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 C3orf14Q9HBI5 128 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 MAN2C1Q9NTJ4 1040 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 BCAP29Q9UHQ4 241 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 VPS4AQ9UN37 437 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 TP53TG5Q9Y2B4 290 aa7.52□□□□□ -1.21
CHD6-201ENST00000309279 A0A1W2PP18 115 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 WWP2O00308 870 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 SLC22A2O15244 555 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 ACOX3O15254 700 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 CFLARO15519 480 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 DENRO43583 198 aaKnown RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 SPRY1O43609 319 aaPredicted RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 MITFO75030 526 aaPredicted RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 SOX30O94993 753 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 RPP14O95059 124 aaKnown RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 ZFPL1O95159 310 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 NADKO95544 446 aaPredicted RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 CRYZL1O95825 349 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 FAM107AO95990 144 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 INHBBP09529 407 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 H2AFB2P0C5Z0 115 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 COX5BP10606 129 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 GIFP27352 417 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 IFNA8P32881 189 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 CD96P40200 585 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 SLC1A3P43003 542 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 TNFSF10P50591 281 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 SSR4P51571 173 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 PSPHP78330 225 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 PSG6Q00889 435 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 LY6DQ14210 128 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.51□□□□□ -1.21
CHD6-201ENST00000309279 AGKQ53H12 422 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 LACTB2Q53H82 288 aaPredicted RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 BHLHB9Q6PI77 547 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 IL20RBQ6UXL0 311 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 ASB18Q6ZVZ8 466 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 SERPINA12Q8IW75 414 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 CISD2Q8N5K1 135 aaKnown RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 RBMXL3Q8N7X1 1067 aaKnown RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 SFXN5Q8TD22 340 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 GTF2H4Q92759 462 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 NMD3Q96D46 503 aaKnown RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 LCORQ96JN0 433 aaPredicted RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 MS4A4EQ96PG1 132 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 PANX1Q96RD7 426 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 TRIB1Q96RU8 372 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 LMF2Q9BU23 707 aaKnown RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 NMUR2Q9GZQ4 415 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms