RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 HNRNPCL3B7ZW38 293 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 ZNF593O00488 134 aaPredicted RBP13.46□□□□□ -0.26
PTPN9-201ENST00000306726 HNRNPCL4P0DMR1 293 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 GDI1P31150 447 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 RAB28P51157 221 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 FBXW4P57775 412 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 SORDQ00796 357 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 FUT5Q11128 374 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 FAAH2Q6GMR7 532 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 ZAR1Q86SH2 424 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 CMTM4Q8IZR5 234 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 SPERTQ8NA61 448 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 LINC00052Q96N35 136 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 LHX9Q9NQ69 397 aa13.46□□□□□ -0.26
PTPN9-201ENST00000306726 IRGMA1A4Y4 181 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 DCDC2BA2VCK2 349 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 TMIGD3P0DMS9 266 aaPredicted RBP13.45□□□□□ -0.26
PTPN9-201ENST00000306726 CMPK1P30085 196 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 LIMS1P48059 325 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 PRRT3Q5FWE3 981 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 ARSKQ6UWY0 536 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 TEX19Q8NA77 164 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 OR52A5Q9H2C5 316 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 NIPAL2Q9H841 368 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 IL21RQ9HBE5 538 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 RABL2BQ9UNT1 228 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 AHCTF1Q8WYP5 2266 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 OR6A2O95222 327 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 TBX6O95947 436 aaPredicted RBP13.45□□□□□ -0.26
PTPN9-201ENST00000306726 F3P13726 295 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 MAT1AQ00266 395 aaKnown RBP13.45□□□□□ -0.26
PTPN9-201ENST00000306726 BIKQ13323 160 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 PYHIN1Q6K0P9 492 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 KDM8Q8N371 416 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 LRRC25Q8N386 305 aaPredicted RBP13.45□□□□□ -0.26
PTPN9-201ENST00000306726 OR5K2Q8NHB8 316 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 GOT1L1Q8NHS2 421 aaPredicted RBP13.45□□□□□ -0.26
PTPN9-201ENST00000306726 CREB3L1Q96BA8 519 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 METTL2AQ96IZ6 378 aaKnown RBP13.45□□□□□ -0.26
PTPN9-201ENST00000306726 MARVELD1Q9BSK0 173 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 PINK1Q9BXM7 581 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 C20orf85Q9H1P6 137 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 ASB6Q9NWX5 421 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 FBXO9Q9UK97 447 aaPredicted RBP13.45□□□□□ -0.26
PTPN9-201ENST00000306726 MAN2B1O00754 1011 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 AGPAT2O15120 278 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 IFNGP01579 166 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 APODP05090 189 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 LCTLQ6UWM7 567 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 LRRN1Q6UXK5 716 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 C3P1Q6ZMU1 363 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 IKBIPQ70UQ0 350 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 CD163Q86VB7 1156 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 ZNF563Q8TA94 476 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 KXD1Q9BQD3 176 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 ACTRT3Q9BYD9 372 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 TMEM74BQ9NUR3 256 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 MKL2Q9ULH7 1088 aa13.45□□□□□ -0.26
PTPN9-201ENST00000306726 ZNF35P13682 527 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 SKP1P63208 163 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 OLFML2AQ68BL7 652 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 OR56B4Q8NH76 319 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 RERGQ96A58 199 aaPredicted RBP13.44□□□□□ -0.26
PTPN9-201ENST00000306726 RSPRY1Q96DX4 576 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 RBM18Q96H35 190 aaKnown RBP13.44□□□□□ -0.26
PTPN9-201ENST00000306726 ZNF514Q96K75 400 aaPredicted RBP13.44□□□□□ -0.26
PTPN9-201ENST00000306726 ZNF471Q9BX82 626 aaPredicted RBP13.44□□□□□ -0.26
PTPN9-201ENST00000306726 ACTR6Q9GZN1 396 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 LIN7BQ9HAP6 207 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 OR2S2Q9NQN1 319 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 SLC2A4RGQ9NR83 387 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 SF3B6Q9Y3B4 125 aaKnown RBP13.44□□□□□ -0.26
PTPN9-201ENST00000306726 ARHGEF17Q96PE2 2063 aaPredicted RBP13.44□□□□□ -0.26
PTPN9-201ENST00000306726 NPIPB8E9PQR5 432 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 M0QYG6 137 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 RCBTB2O95199 551 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 HIST1H1CP16403 213 aaKnown RBP13.44□□□□□ -0.26
PTPN9-201ENST00000306726 HTR1FP30939 366 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 MNDAP41218 407 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 ELAVL3Q14576 367 aaKnown RBP13.44□□□□□ -0.26
PTPN9-201ENST00000306726 LEG1Q6P5S2 330 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 ABHD17CQ6PCB6 329 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 PARM1Q6UWI2 310 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 WDR88Q6ZMY6 472 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 Q7L0L9 218 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 TCTE3Q8IZS6 198 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 JAGN1Q8N5M9 183 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 OR2A1Q8NGT9 310 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 SETD7Q8WTS6 366 aaKnown RBP13.44□□□□□ -0.26
PTPN9-201ENST00000306726 FCAMRQ8WWV6 532 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 PTP4A1Q93096 173 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 MS4A6EQ96DS6 147 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 KCND3Q9UK17 655 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 MPC2O95563 127 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 NLRC3Q7RTR2 1065 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 ETFBKMTQ8IXQ9 262 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 WDFY2Q96P53 400 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 DHRS9Q9BPW9 319 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 CA10Q9NS85 328 aa13.44□□□□□ -0.26
PTPN9-201ENST00000306726 TAS2R3Q9NYW6 316 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms