RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TNFRSF1BP20333 461 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 CPOXP36551 454 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 CRYBA2P53672 197 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 RASGEF1BQ0VAM2 473 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 CDSNQ15517 529 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 OR7A5Q15622 319 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 IFI44LQ53G44 452 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 C1orf140Q5VVS0 124 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 VWA1Q6PCB0 445 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 CBLL1Q75N03 491 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 FAM214BQ7L5A3 538 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 LUZP2Q86TE4 346 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 LIX1LQ8IVB5 337 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 FAM156AQ8NDB6 213 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 OR6K3Q8NGY3 331 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ADAMTS16Q8TE57 1224 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ABHD3Q8WU67 409 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 HSH2DQ96JZ2 352 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 RSPO3Q9BXY4 272 aaPredicted RBP9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 EMC3Q9P0I2 261 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 KLHL13Q9P2N7 655 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 FOXD3Q9UJU5 478 aaPredicted RBP9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PRPF19Q9UMS4 504 aaKnown RBP9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PROCRQ9UNN8 238 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 SNX13Q9Y5W8 968 aa9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 GCN1Q92616 2671 aaKnown RBP9.83□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 BAHCC1Q9P281 2608 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 A0A087WUJ7 227 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 SMAD9O15198 467 aaKnown RBP9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 OR2T1O43869 369 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 CYTIPO60759 359 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 TNFSF13O75888 250 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 IMPDH2P12268 514 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 FPR1P21462 350 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 AGTR1P30556 359 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 UQCRC1P31930 480 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 RPS5P46782 204 aaKnown RBP9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 OR1E2P47887 323 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 CDH12P55289 794 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 CEACAM7Q14002 265 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 NPTX1Q15818 432 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 DNAL1Q4LDG9 190 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 OTUD3Q5T2D3 398 aaPredicted RBP9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 FAM69AQ5T7M9 428 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ABLIM2Q6H8Q1 611 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 TTC33Q6PID6 262 aaPredicted RBP9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PAQR6Q6TCH4 344 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 RINLQ6ZS11 566 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 VTCN1Q7Z7D3 282 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 STK32CQ86UX6 486 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 CYP4Z1Q86W10 505 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 RBM45Q8IUH3 476 aaKnown RBP9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 OR4D11Q8NGI4 311 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 SLC41A3Q96GZ6 507 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PRRC1Q96M27 445 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 NSMCE2Q96MF7 247 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 WFDC6Q9BQY6 131 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PRR14Q9BWN1 585 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 RBM24Q9BX46 236 aaKnown RBP9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PCDHAC1Q9H158 963 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 C1orf21Q9H246 121 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 MUC13Q9H3R2 512 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 GP6Q9HCN6 339 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 FANCFQ9NPI8 374 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 SLC7A7Q9UM01 511 aa9.82□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 TRAV36DV7A0A075B6V5 113 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 LIPT2A6NK58 231 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 GPR171O14626 319 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 MSTNO14793 375 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ARPC2O15144 300 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 GYG2O15488 501 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 TPST2O60704 377 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 OR5F1O95221 314 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 YES1P07947 543 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 T-ENOLP0DO92 83 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 COX6B1P14854 86 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PTNP21246 168 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 GRNP28799 593 aaKnown RBP9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PEX19P40855 299 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 KIR2DL2P43627 348 aaPredicted RBP9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 IL1RL1Q01638 556 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 MFSD13AQ14CX5 517 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 TUSC5Q8IXB3 177 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 C10orf53Q8N6V4 93 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 MFSD8Q8NHS3 518 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 RNASE6Q93091 150 aaKnown RBP9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 SLC25A36Q96CQ1 311 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 STARD4Q96DR4 205 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 MPP4Q96JB8 637 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 PSD2Q9BQI7 771 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 TMEM43Q9BTV4 400 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ASPNQ9BXN1 380 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 C12orf49Q9H741 205 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 GORASP2Q9H8Y8 452 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 SLC24A3Q9HC58 644 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 CD300AQ9UGN4 299 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 V9GYQ6 96 aa9.81□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ZNF724A8MTY0 619 aa9.8□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 NPIPB7O75200 414 aa9.8□□□□□ -0.84
CSPG4P1Y-201ENST00000306641 ATP5HO75947 161 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms