RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 OR10Z1Q8NGY1 313 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 SCPEP1Q9HB40 452 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 AK1P00568 194 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 F10P00742 488 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 ACKR3P25106 362 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 IL1R2P27930 398 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 MC3RP41968 323 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 EMP2P54851 167 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 MSS51Q4VC12 460 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 OR2M3Q8NG83 312 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 RNF141Q8WVD5 230 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 YTHDF2Q9Y5A9 579 aaKnown RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 CDHR4A6H8M9 788 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 SH2D7A6NKC9 451 aaPredicted RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 GM2AP17900 193 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 TPGS2Q68CL5 300 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 CACNG3O60359 315 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 LSAMPQ13449 338 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 GUK1Q16774 197 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 SOWAHAQ2M3V2 549 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 ZFP90Q8TF47 636 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 H1FXQ92522 213 aaKnown RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 PCDHGA9Q9Y5G4 932 aaKnown RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 LEFTY1O75610 366 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 FPGSQ05932 587 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 EXOSC2Q13868 293 aaKnown RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 TMEM97Q5BJF2 176 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF761Q86XN6 746 aaPredicted RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 FBXL16Q8N461 479 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 OR4F5Q8NH21 305 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 OR4F4Q96R69 305 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 ARHGAP39Q9C0H5 1083 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 FAM124BQ9H5Z6 455 aaPredicted RBP12.57□□□□□ -0.4
TRIM56-201ENST00000306085 SALL4Q9UJQ4 1053 aa12.57□□□□□ -0.4
TRIM56-201ENST00000306085 ADAMTS13Q76LX8 1427 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ATP1B3P54709 279 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 PLAG1Q6DJT9 500 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ADGRG3Q86Y34 549 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 SLC5A8Q8N695 610 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 SEC22AQ96IW7 307 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 TTYH3Q9C0H2 523 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF90Q03938 601 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 DCAF12L1Q5VU92 463 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 GRASPQ7Z6J2 395 aaPredicted RBP12.56□□□□□ -0.4
TRIM56-201ENST00000306085 SIMC1Q8NDZ2 872 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF845Q96IR2 970 aaPredicted RBP12.56□□□□□ -0.4
TRIM56-201ENST00000306085 C5AR2Q9P296 337 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 FBXL4Q9UKA2 621 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 M0R3H8 397 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 SORBS2O94875 1100 aaKnown RBP12.56□□□□□ -0.4
TRIM56-201ENST00000306085 OSMP13725 252 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF266Q14584 549 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ECHDC3Q96DC8 303 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 A0A0D9SEW6 157 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 OR7C1O76099 320 aaPredicted RBP12.56□□□□□ -0.4
TRIM56-201ENST00000306085 NDUFB2O95178 105 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 EGFP01133 1207 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 OR4K5Q8NGD3 323 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 TMEM239Q8WW34 195 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 FOXJ1Q92949 421 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.56□□□□□ -0.4
TRIM56-201ENST00000306085 PHF1O43189 567 aaPredicted RBP12.56□□□□□ -0.4
TRIM56-201ENST00000306085 DNAJB1P25685 340 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 MPGP29372 298 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF542PQ5EBM4 170 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 GPR88Q9GZN0 384 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 RCE1Q9Y256 329 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 KIAA1324LA8MWY0 1029 aaPredicted RBP12.56□□□□□ -0.4
TRIM56-201ENST00000306085 C1GALT1C1LP0DN25 315 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 UBL4AP11441 157 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 RAB13P51153 203 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 HAGHQ16775 308 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF322Q6U7Q0 402 aaPredicted RBP12.56□□□□□ -0.4
TRIM56-201ENST00000306085 MYADMQ96S97 322 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ZCCHC4Q9H5U6 513 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 PGAP2Q9UHJ9 254 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 TMEM72A0PK05 275 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 BMPR1BO00238 502 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 BMPR1AP36894 532 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 C21orf62-AS1Q17RA5 79 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 APH1AQ96BI3 265 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 MS4A4EQ96PG1 132 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ANKRD19PQ9H560 264 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ZNF587BE7ETH6 402 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 KLF11O14901 512 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 ALDOAP04075 364 aaKnown RBP12.56□□□□□ -0.4
TRIM56-201ENST00000306085 UBE2IP63279 158 aaKnown RBP12.56□□□□□ -0.4
TRIM56-201ENST00000306085 GPR174Q9BXC1 333 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 MVB12BQ9H7P6 319 aa12.56□□□□□ -0.4
TRIM56-201ENST00000306085 hCG_1809904A0A1W2PP81 198 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 A0A1W2PPE2 198 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 A0A1W2PR64 198 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 A0A1W2PRV1 198 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 IL1RNP18510 177 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 INCA1Q0VD86 236 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 TBCEQ15813 527 aaPredicted RBP12.55□□□□□ -0.4
TRIM56-201ENST00000306085 OR2B8PP59922 312 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 PHLDA2Q53GA4 152 aa12.55□□□□□ -0.4
TRIM56-201ENST00000306085 RHEBL1Q8TAI7 183 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms