RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 PDLIM1O00151 329 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 PRB1P04280 392 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 FCGR1AP12314 374 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 FPR1P21462 350 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 SFTPDP35247 375 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 RPS5P46782 204 aaKnown RBP8.51□□□□□ -1.05
RFX3-201ENST00000302303 CLK1P49759 484 aaKnown RBP8.51□□□□□ -1.05
RFX3-201ENST00000302303 DAPP51397 102 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 SMIM11AP58511 58 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 ZNF74Q16587 644 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 SOWAHCQ53LP3 525 aaPredicted RBP8.51□□□□□ -1.05
RFX3-201ENST00000302303 KRTCAP3Q53RY4 240 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 FGD3Q5JSP0 725 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 C1orf140Q5VVS0 124 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 FAHD1Q6P587 224 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 TTC33Q6PID6 262 aaPredicted RBP8.51□□□□□ -1.05
RFX3-201ENST00000302303 PLXDC2Q6UX71 529 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 TMPPEQ6ZT21 453 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 TMPRSS11FQ6ZWK6 438 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 OR6S1Q8NH40 331 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 MIB2Q96AX9 1013 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 NRBF2Q96F24 287 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 KLHL15Q96M94 604 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 FEVQ99581 238 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 SLC29A1Q99808 456 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 NIPSNAP1Q9BPW8 284 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 SRXN1Q9BYN0 137 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 ENKD1Q9H0I2 346 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 REEP1Q9H902 201 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 RNPEPL1Q9HAU8 725 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 SERINC1Q9NRX5 453 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 STOML1Q9UBI4 398 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 TMEFF2Q9UIK5 374 aaPredicted RBP8.51□□□□□ -1.05
RFX3-201ENST00000302303 OAZ3Q9UMX2 235 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 MPDZO75970 2070 aa8.51□□□□□ -1.05
RFX3-201ENST00000302303 TRAV36DV7A0A075B6V5 113 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 ENO4A6NNW6 628 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 TTLL8A6PVC2 850 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 FAM47E-STBD1D6RA91 191 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 KPNA4O00629 521 aaPredicted RBP8.5□□□□□ -1.05
RFX3-201ENST00000302303 DLGAP1O14490 977 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 TNFSF11O14788 317 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 CASQ2O14958 399 aaPredicted RBP8.5□□□□□ -1.05
RFX3-201ENST00000302303 RAMP1O60894 148 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 PTP4A3O75365 173 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 ATP6V1G2O95670 118 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 BAG2O95816 211 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 ASAH2BP0C7U1 165 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 FKBP2P26885 142 aaKnown RBP8.5□□□□□ -1.05
RFX3-201ENST00000302303 GSSP48637 474 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 DIO1P49895 249 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 PPP2R2BQ00005 443 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 GK3PQ14409 553 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 ZNF239Q16600 458 aaKnown RBP8.5□□□□□ -1.05
RFX3-201ENST00000302303 RTL6Q6ICC9 239 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 ARHGAP11AQ6P4F7 1023 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 ZNF730Q6ZMV8 503 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 ESPNLQ6ZVH7 1005 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 OR5K1Q8NHB7 308 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 MFSD8Q8NHS3 518 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 RNF217Q8TC41 542 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 SLC25A43Q8WUT9 341 aaPredicted RBP8.5□□□□□ -1.05
RFX3-201ENST00000302303 STMN2Q93045 179 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 BPIFA2Q96DR5 249 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 ZNF845Q96IR2 970 aaPredicted RBP8.5□□□□□ -1.05
RFX3-201ENST00000302303 OR5B2Q96R09 309 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 BDH2Q9BUT1 245 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 LDAHQ9H6V9 325 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 SMURF2Q9HAU4 748 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 C6orf203Q9P0P8 240 aaPredicted RBP8.5□□□□□ -1.05
RFX3-201ENST00000302303 REV1Q9UBZ9 1251 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 ING1Q9UK53 422 aaPredicted RBP8.5□□□□□ -1.05
RFX3-201ENST00000302303 RALYQ9UKM9 306 aaKnown RBP8.5□□□□□ -1.05
RFX3-201ENST00000302303 TRAPPC4Q9Y296 219 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 MED31Q9Y3C7 131 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 HDGFL3Q9Y3E1 203 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 KIAA1549Q9HCM3 1950 aa8.5□□□□□ -1.05
RFX3-201ENST00000302303 OR14I1A6ND48 311 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 ARRDC5A6NEK1 342 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 SAC3D1A6NKF1 404 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 NPIPA2E9PIF3 369 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 E9PQ18 207 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 NPIPA3F8WFD2 350 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 G3V2T6 193 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 MS4A18H0YCH9 400 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 SOCS2O14508 198 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 GNGT2O14610 69 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 OR7A10O76100 309 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 PMS2P2O95744 297 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 CH25HO95992 272 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 IFI30P13284 250 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 POU3F2P20265 443 aaPredicted RBP8.49□□□□□ -1.05
RFX3-201ENST00000302303 GPR4P46093 362 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 AGFG1P52594 562 aaKnown RBP8.49□□□□□ -1.05
RFX3-201ENST00000302303 RPS4XP62701 263 aaKnown RBP8.49□□□□□ -1.05
RFX3-201ENST00000302303 MS4A18Q3C1V0 323 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 GXYLT1Q4G148 440 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 FAM69AQ5T7M9 428 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 LPCAT4Q643R3 524 aa8.49□□□□□ -1.05
RFX3-201ENST00000302303 CD300LDQ6UXZ3 194 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms