RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PWWP2BQ6NUJ5 590 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF836Q6ZNA1 936 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 FRRS1Q6ZNA5 592 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF433Q8N7K0 673 aaPredicted RBP10.03□□□□□ -0.8
ZNF558-201ENST00000301475 BOLLQ8N9W6 283 aaKnown RBP10.03□□□□□ -0.8
ZNF558-201ENST00000301475 CMTM3Q96MX0 182 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 ADAT1Q9BUB4 502 aaKnown RBP10.03□□□□□ -0.8
ZNF558-201ENST00000301475 DNTTIP1Q9H147 329 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 KLHL31Q9H511 634 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 C6orf106Q9H6K1 298 aaPredicted RBP10.03□□□□□ -0.8
ZNF558-201ENST00000301475 CLDND1Q9NY35 253 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF443Q9Y2A4 671 aaPredicted RBP10.03□□□□□ -0.8
ZNF558-201ENST00000301475 PLEKHM1Q9Y4G2 1056 aa10.03□□□□□ -0.8
ZNF558-201ENST00000301475 A0A087WV48 116 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 A0A1W2PR48 441 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 FAM86C2PA6NEL3 165 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 GRM6O15303 877 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 HTR2AP28223 471 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 PSMB10P40306 273 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 ART1P52961 327 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 IGSF11Q5DX21 431 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 C9orf64Q5T6V5 341 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 NUDT18Q6ZVK8 323 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 DPPA4Q7L190 304 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 PM20D2Q8IYS1 436 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 PUSL1Q8N0Z8 303 aaKnown RBP10.02□□□□□ -0.8
ZNF558-201ENST00000301475 OR56A1Q8NGH5 318 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 OR4D10Q8NGI6 311 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 OR9A2Q8NGT5 310 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 C1orf216Q8TAB5 229 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 PXYLP1Q8TE99 480 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 PELI2Q9HAT8 420 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 OR5V1Q9UGF6 321 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 ATG4BQ9Y4P1 393 aa10.02□□□□□ -0.8
ZNF558-201ENST00000301475 TRAV14DV4A0A0A6YYC5 116 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 ABHD14A-ACY1A0A1B0GW23 586 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 UBE2QL1A1L167 161 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 SYNDIG1LA6NDD5 238 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 PRSS44E7EML9 344 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 ADAM11O75078 769 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 POP7O75817 140 aaKnown RBP10.02□□□□□ -0.81
ZNF558-201ENST00000301475 SRMP19623 302 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 FAM46CQ5VWP2 391 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 TMEM215Q68D42 235 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 GAREM2Q75VX8 874 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 CBLN2Q8IUK8 224 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 EID2Q8N6I1 236 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 NUP43Q8NFH3 380 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 RAD51AP1Q96B01 352 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 ZMYND19Q96E35 227 aaPredicted RBP10.02□□□□□ -0.81
ZNF558-201ENST00000301475 OR52A5Q9H2C5 316 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 EPHX3Q9H6B9 360 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 SAGE1Q9NXZ1 904 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 SLC35A3Q9Y2D2 325 aa10.02□□□□□ -0.81
ZNF558-201ENST00000301475 ARPC4-TTLL3A0A0A6YYG9 625 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 TRBV2A0A0J9YWF9 115 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 ATG12O94817 140 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 PPP1R3DO95685 299 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 EFEMP2O95967 443 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 RLN1P04808 185 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 NAA10P41227 235 aaPredicted RBP10.01□□□□□ -0.81
ZNF558-201ENST00000301475 RAB13P51153 203 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 ARFIP1P53367 373 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 SIRPAP78324 504 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 S100A12P80511 92 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 PLA2G7Q13093 441 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 TCTN1Q2MV58 587 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 ZNF528Q3MIS6 628 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 TSSK4Q6SA08 328 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 MOB3CQ70IA8 216 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 TMEM25Q86YD3 366 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 OR51L1Q8NGJ5 315 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 OR4C16Q8NGL9 310 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 CYB5D2Q8WUJ1 264 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 SLC19A3Q9BZV2 496 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 KLF15Q9UIH9 416 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 ADAM29Q9UKF5 820 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 LHX6Q9UPM6 363 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 SIGLEC7Q9Y286 467 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 ACOT7O00154 380 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 AIFM1O95831 613 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 GKN3PP0CG01 181 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 ADCYAP1P18509 176 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 MAPK3P27361 379 aaPredicted RBP10.01□□□□□ -0.81
ZNF558-201ENST00000301475 GABRR2P28476 465 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 MEOX2P50222 304 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 METAP1P53582 386 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 TAS2R20P59543 309 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 GUCA2BQ16661 112 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 TMCO2Q7Z6W1 182 aaPredicted RBP10.01□□□□□ -0.81
ZNF558-201ENST00000301475 LDLRAD3Q86YD5 345 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 SLC16A11Q8NCK7 471 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 OR51A7Q8NH64 312 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 SLC35A4Q96G79 324 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 PRDM9Q9NQV7 894 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 SLC39A1Q9NY26 324 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 CTSFQ9UBX1 484 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 CYB5R1Q9UHQ9 305 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 SCN3AQ9NY46 2000 aa10.01□□□□□ -0.81
ZNF558-201ENST00000301475 A0A1W2PPV9 198 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms