RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ITPKBP27987 946 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 HTR2AP28223 471 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 FRKP42685 505 aaPredicted RBP13.52□□□□□ -0.24
COL6A2-201ENST00000300527 RAG2P55895 527 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 HIST3H2AQ7L7L0 130 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 HIST1H2ACQ93077 130 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 SLC25A38Q96DW6 304 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 ACTRT3Q9BYD9 372 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 EXO5Q9H790 373 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 CMC2Q9NRP2 79 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 CALML5Q9NZT1 146 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 CDV3Q9UKY7 258 aaKnown RBP13.52□□□□□ -0.24
COL6A2-201ENST00000300527 SLC35A3Q9Y2D2 325 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 ADAM18Q9Y3Q7 739 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 ZNF175Q9Y473 711 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 ZNF98A6NK75 572 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 DISC1C4P0D8 188 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 GABARAPH6UMI1 98 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 NARSO43776 548 aaKnown RBP13.52□□□□□ -0.25
COL6A2-201ENST00000300527 RAD1O60671 282 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 C8AP07357 584 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 CCR2P41597 374 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 ART1P52961 327 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 PLA2G7Q13093 441 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 CDK5R1Q15078 307 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 DUSP5Q16690 384 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF660Q6AZW8 331 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-201ENST00000300527 PXT1Q8NFP0 134 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 HAVCR2Q8TDQ0 301 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 TSNAXQ99598 290 aaKnown RBP13.52□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF471Q9BX82 626 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-201ENST00000300527 LGR4Q9BXB1 951 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 KCNK15Q9H427 330 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 TCF7L1Q9HCS4 588 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 TAS2R5Q9NYW4 299 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 GLS2Q9UI32 602 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF879B4DU55 563 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 DNASE2O00115 360 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-201ENST00000300527 PRICKLE3O43900 615 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-201ENST00000300527 GTF2F2P13984 249 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 TEAD2Q15562 447 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 FNDC3BQ53EP0 1204 aaKnown RBP13.52□□□□□ -0.25
COL6A2-201ENST00000300527 KCT2Q8NC54 265 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 BPIFCQ8NFQ6 507 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 USB1Q9BQ65 265 aaKnown RBP13.52□□□□□ -0.25
COL6A2-201ENST00000300527 PDCD10Q9BUL8 212 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 CHST6Q9GZX3 395 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 MRPS30Q9NP92 439 aaKnown RBP13.52□□□□□ -0.25
COL6A2-201ENST00000300527 OPN4Q9UHM6 478 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 ST6GALNAC2Q9UJ37 374 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 FBXL3Q9UKT7 428 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 MOKQ9UQ07 419 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 ERVK-19Q9WJR5 959 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 OR1A2Q9Y585 309 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 HCFC2Q9Y5Z7 792 aa13.52□□□□□ -0.25
COL6A2-201ENST00000300527 A0A1B0GTH9 108 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 IFITM5A6NNB3 132 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 OLFM2O95897 454 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 FGF2P09038 288 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 FAM199XQ6PEV8 388 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 CDH26Q8IXH8 852 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 MUC20Q8N307 709 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 SLC25A28Q96A46 364 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 SEC22AQ96IW7 307 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 PELI2Q9HAT8 420 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 SPHK2Q9NRA0 654 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 MYEF2Q9P2K5 600 aaKnown RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 PRELID3BQ9Y3B1 194 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 IER3IP1Q9Y5U9 82 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 RNF215Q9Y6U7 377 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 C5orf42Q9H799 3197 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 MANSC4A6NHS7 340 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 LRRC72A6NJI9 287 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 GPR31O00270 319 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 ATG12O94817 140 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 ASGR2P07307 311 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 LUMP51884 338 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 PDSS1Q5T2R2 415 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF626Q68DY1 528 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 HAGHLQ6PII5 290 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 SLC35F2Q8IXU6 374 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 LNX2Q8N448 690 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 FAM71CQ8NEG0 241 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 SMIM19Q96E16 107 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 LMLNQ96KR4 655 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 MICU1Q9BPX6 476 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 PELOQ9BRX2 385 aaKnown RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 ACTR10Q9NZ32 417 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 ZNF230Q9UIE0 474 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 KIAA1671Q9BY89 1806 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 CCSO14618 274 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 TGM5O43548 720 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 GALR3O60755 368 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 LDOC1O95751 146 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 GAAP10253 952 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 PRKAR1BP31321 381 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 RAB33AQ14088 237 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 TAF13Q15543 124 aa13.51□□□□□ -0.25
COL6A2-201ENST00000300527 MRM1Q6IN84 353 aaKnown RBP13.51□□□□□ -0.25
COL6A2-201ENST00000300527 TSSK4Q6SA08 328 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms