RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 TYMSP04818 313 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 TPOP07202 933 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 CSN1S1P47710 185 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 BTG3Q14201 252 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 FBXO31Q5XUX0 539 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 PM20D1Q6GTS8 502 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 CYB5RLQ6IPT4 315 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR2L13Q8N349 312 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR4K2Q8NGD2 314 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 PCNPQ8WW12 178 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 TSGA13Q96PP4 275 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR5B2Q96R09 309 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 PBX4Q9BYU1 374 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 AMBNQ9NP70 447 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 NOCTQ9UK39 431 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 NCBP2LA6PVI3 153 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF814B7Z6K7 855 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 TCP10L2B9ZVM9 353 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ARPC1BO15143 372 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SLC31A1O15431 190 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 INSIG1O15503 277 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 C4BPAP04003 597 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 FABP2P12104 132 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 GP1BBP13224 206 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 PSMB6P28072 239 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 DUSP1P28562 367 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ICAM3P32942 547 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 GRM7Q14831 915 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 C6orf136Q5SQH8 315 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 C17orf107Q6ZR85 190 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 LNX1Q8TBB1 728 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 LRRN4Q8WUT4 740 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SFT2D1Q8WV19 159 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ATF5Q9Y2D1 282 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 UBIAD1Q9Y5Z9 338 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ANKHD1Q8IWZ3 2542 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 LOC102725191A0A1B0GVB3 256 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 GRIN3BO60391 1043 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 APBB3O95704 486 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 POP4O95707 220 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 GHRHP01286 108 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 IL5P05113 134 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 GALTP07902 379 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 CTSEP14091 401 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 AK4P27144 223 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ERVFRD-1P60508 538 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 CRMP1Q14194 572 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SLC10A1Q14973 349 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 CTXN3Q4LDR2 81 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 LEMD1Q68G75 181 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR9A2Q8NGT5 310 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 PMCHL2Q9BQD1 86 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SORBS1Q9BX66 1292 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 DOK5Q9P104 306 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 FBXW2Q9UKT8 454 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 GRM6O15303 877 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MT-CYBP00156 380 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MTHFD2P13995 350 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TNFSF8P32971 234 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CATR1Q13166 79 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 HTR4Q13639 388 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 PMCHL1Q16048 86 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SEZ6Q53EL9 994 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 GGNBP1Q5YKI7 109 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 RAET1GQ6H3X3 334 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ZDHHC24Q6UX98 284 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 HFE2Q6ZVN8 426 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SLC51AQ86UW1 340 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CADM3Q8N126 398 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR8U1Q8NH10 309 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM190Q8WZ59 177 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF681Q96N22 645 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 DPH7Q9BTV6 452 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM231Q9H6L2 316 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ELP3Q9H9T3 547 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MYOTQ9UBF9 498 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TESQ9UGI8 421 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 A8MT66 165 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 NUPL2O15504 423 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ALDH2P05091 517 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 USP17L7P0C7H9 530 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TSFMP43897 325 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SPCS3P61009 180 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 WDR5P61964 334 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 GPLD1P80108 840 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF91Q05481 1191 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 DOC2AQ14183 400 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 C2CD4AQ8NCU7 369 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR51G2Q8NGK0 314 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 CMTM2Q8TAZ6 248 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 THEM6Q8WUY1 208 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 DNAJC19Q96DA6 116 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 TRMT2BQ96GJ1 504 aaKnown RBP4.54□□□□□ -1.68
CSMD3-201ENST00000297405 LRIG1Q96JA1 1093 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 HRASLS5Q96KN8 279 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 MYADMQ96S97 322 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 OR6C75A6NL08 312 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 LGALS8O00214 317 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SYNGR4O95473 234 aa4.54□□□□□ -1.68
CSMD3-201ENST00000297405 SIX6O95475 246 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms