RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 CLPSP04118 112 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 WNT1P04628 370 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 OR2T7P0C7T2 308 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 RBMS1P29558 406 aaKnown RBP8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 GABRA4P48169 554 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 GFERP55789 205 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 HSD17B7P56937 341 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 ACTA2P62736 377 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 ACTG2P63267 376 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 CD83Q01151 205 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 GGTLC2Q14390 218 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 ELOCQ15369 112 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 CCDC85BQ15834 202 aaPredicted RBP8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 PAMR1Q6UXH9 720 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 MS4A15Q8N5U1 240 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 GATSQ8NAP1 163 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 OR2T27Q8NH04 317 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 TRMT10AQ8TBZ6 339 aaKnown RBP8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 ZPLD1Q8TCW7 415 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 SMIM19Q96E16 107 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 TGM7Q96PF1 710 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 NMNAT3Q96T66 252 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 SMAD5Q99717 465 aaKnown RBP8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 HDHD2Q9H0R4 259 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 CCDC86Q9H6F5 360 aaKnown RBP8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 ZNF337Q9Y3M9 751 aa8.52□□□□□ -1.05
UBLCP1-201ENST00000296786 IGHV5-51A0A0C4DH38 117 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 CHURC1-FNTBB4DL54 471 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 LANCL1O43813 399 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 PPM1BO75688 479 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 TFPIP10646 304 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 RAB3BP20337 219 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 NPR2P20594 1047 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 ALAS2P22557 587 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 TCEA1P23193 301 aaKnown RBP8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 HLA-DMAP28067 261 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 NUDT1P36639 197 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 FNTBP49356 437 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 GDI2P50395 445 aaKnown RBP8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 CLDN20P56880 219 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 CDK5R1Q15078 307 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 CDONQ4KMG0 1287 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 KLHL26Q53HC5 615 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 COL13A1Q5TAT6 717 aaPredicted RBP8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 DPY19L2P2Q6ZN68 376 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 MED25Q71SY5 747 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 SYT13Q7L8C5 426 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 SLC35F2Q8IXU6 374 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 ZSCAN1Q8NBB4 408 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 NPEPL1Q8NDH3 523 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 LMX1AQ8TE12 382 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 THAP4Q8WY91 577 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 RASD2Q96D21 266 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 ZNF285Q96NJ3 590 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 NRIP3Q9NQ35 241 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 GNG8Q9UK08 70 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 PLCL2Q9UPR0 1127 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 ALG5Q9Y673 324 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 MAU2Q9Y6X3 613 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 IGKV1D-42A0A075B6H8 117 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 IGHV1OR15-9A0A0B4J2B8 117 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 OR6C68A6NDL8 312 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 C17orf105B2RV13 164 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 OGG1O15527 345 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 SELENOFO60613 162 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 SERPINI2O75830 405 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 OR7A10O76100 309 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 NME1P15531 152 aaKnown RBP8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 SPI1P17947 270 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 CD1CP29017 333 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 PITPNBP48739 271 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 RPS4XP62701 263 aaKnown RBP8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 ERVK-25P63136 954 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 SIRPAP78324 504 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 PON3Q15166 354 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 CD226Q15762 336 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 LYPD4Q6UWN0 246 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 SYT9Q86SS6 491 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 SYS1Q8N2H4 156 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 ZNF321PQ8N8H1 164 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 TEX19Q8NA77 164 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 OR6K6Q8NGW6 343 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 OR14A16Q8NHC5 309 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 SNX33Q8WV41 574 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 TRIM63Q969Q1 353 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 CLIP3Q96DZ5 547 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 MARVELD1Q9BSK0 173 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 THAP7Q9BT49 309 aaPredicted RBP8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 SPRTNQ9H040 489 aaPredicted RBP8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 ACOXLQ9NUZ1 547 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 PRODH2Q9UF12 536 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 COPS3Q9UNS2 423 aa8.51□□□□□ -1.05
UBLCP1-201ENST00000296786 TRBV2A0A0J9YWF9 115 aa8.5□□□□□ -1.05
UBLCP1-201ENST00000296786 FAM172BPA6NC97 362 aa8.5□□□□□ -1.05
UBLCP1-201ENST00000296786 LILRA5A6NI73 299 aa8.5□□□□□ -1.05
UBLCP1-201ENST00000296786 ELOA3DA6NLF2 546 aaPredicted RBP8.5□□□□□ -1.05
UBLCP1-201ENST00000296786 ARPC3O15145 178 aa8.5□□□□□ -1.05
UBLCP1-201ENST00000296786 FZD7O75084 574 aa8.5□□□□□ -1.05
UBLCP1-201ENST00000296786 SERPINA3P01011 423 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms