RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 NAA11Q9BSU3 229 aaPredicted RBP13.96□□□□□ -0.17
TMEM41A-201ENST00000296254 CHODLQ9H9P2 273 aa13.96□□□□□ -0.17
TMEM41A-201ENST00000296254 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.96□□□□□ -0.17
TMEM41A-201ENST00000296254 LGALS13Q9UHV8 139 aa13.96□□□□□ -0.17
TMEM41A-201ENST00000296254 MOKQ9UQ07 419 aa13.96□□□□□ -0.17
TMEM41A-201ENST00000296254 TMED7Q9Y3B3 224 aa13.96□□□□□ -0.17
TMEM41A-201ENST00000296254 PRSS51A0A1B0GVH4 220 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 TMEM72A0PK05 275 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 ZC3H12DA2A288 527 aaKnown RBP13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 SLC35F4A4IF30 521 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 WNT11O96014 354 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 BPGMP07738 259 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 NUDT17P0C025 328 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 TACR3P29371 465 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 NR4A2P43354 598 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 MAP2K6P52564 334 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 PRPS1P60891 318 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 SNRPD2P62316 118 aaKnown RBP13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 GPAT3Q53EU6 434 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 FAM120AOSQ5T036 256 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 ANXA8L1Q5VT79 327 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 IL17RELQ6ZVW7 336 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 CMIPQ8IY22 773 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 PMM1Q92871 262 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 MSI2Q96DH6 328 aaKnown RBP13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 FBXO17Q96EF6 278 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 BOD1Q96IK1 185 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 PRR14Q9BWN1 585 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 DPY30Q9C005 99 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 HEATR1Q9H583 2144 aaKnown RBP13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 AKTIPQ9H8T0 292 aa13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 MARCOQ9UEW3 520 aaPredicted RBP13.95□□□□□ -0.18
TMEM41A-201ENST00000296254 IGHV4-61A0A0C4DH41 118 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 AGAP5A6NIR3 686 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 HMGN4O00479 90 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 FAAHO00519 579 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 CPSF4O95639 269 aaKnown RBP13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 CHI3L1P36222 383 aaPredicted RBP13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 SLC1A3P43003 542 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 ETV4P43268 484 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 CASP8Q14790 479 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 HIKESHIQ53FT3 197 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 OTUD3Q5T2D3 398 aaPredicted RBP13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 ZIC4Q8N9L1 334 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 POMGNT2Q8NAT1 580 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 VPS37AQ8NEZ2 397 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 OR9K2Q8NGE7 335 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 PPP1R36Q96LQ0 422 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 TRNT1Q96Q11 434 aaKnown RBP13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 SLC35A5Q9BS91 424 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 SLC38A1Q9H2H9 487 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 MYOZ1Q9NP98 299 aaPredicted RBP13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 OBP2BQ9NPH6 170 aa13.94□□□□□ -0.18
TMEM41A-201ENST00000296254 IGHV1-18A0A0C4DH31 117 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 LOC100289279A0A1B0GTE1 492 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 C1QCP02747 245 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 CHRM4P08173 479 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 APEHP13798 732 aaKnown RBP13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 UQCRBP14927 111 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 CREB1P16220 341 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 CDH2P19022 906 aaPredicted RBP13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 HNF1AP20823 631 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 RPS4Y1P22090 263 aaKnown RBP13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 SRSF2Q01130 221 aaKnown RBP13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 DPY19L1Q2PZI1 675 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 SPANXN4Q5MJ08 99 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 ZNF781Q8N8C0 355 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 ANKFN1Q8N957 763 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 ZNF385AQ96PM9 386 aaKnown RBP13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 KATNB1Q9BVA0 655 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 SF3B5Q9BWJ5 86 aaKnown RBP13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 CA10Q9NS85 328 aa13.93□□□□□ -0.18
TMEM41A-201ENST00000296254 LOC390937A0A1W2PQ73 354 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 CFAP73A6NFT4 308 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 LIPT2A6NK58 231 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 AQP7P3A6NL99 342 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 E9PBE3 544 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 KLF11O14901 512 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 ITM2AO43736 263 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 TYROBPO43914 113 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 PDE5AO76074 875 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 GPIP06744 558 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 SERPINF1P36955 418 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 EPS8Q12929 822 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 SYPL1Q16563 259 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 TBRG1Q3YBR2 411 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 FAM174BQ3ZCQ3 159 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 MRPL2Q5T653 305 aaKnown RBP13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 AAED1Q7RTV5 226 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 SLC46A3Q7Z3Q1 461 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 ABHD12BQ7Z5M8 362 aaPredicted RBP13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 RNF130Q86XS8 419 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 TMEM99Q8N816 258 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 ANKS4BQ8N8V4 417 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 WDR60Q8WVS4 1066 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 C3orf49Q96BT1 292 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 CCDC115Q96NT0 180 aa13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 ALKBH3Q96Q83 286 aaPredicted RBP13.92□□□□□ -0.18
TMEM41A-201ENST00000296254 SLC38A2Q96QD8 506 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms