RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 EOGTQ5NDL2 527 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 SFRP5Q5T4F7 317 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 HEPHL1Q6MZM0 1159 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 MFSD12Q6NUT3 480 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 CD300LDQ6UXZ3 194 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 GRAMD2AQ8IUY3 354 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 IL17RCQ8NAC3 791 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 OR6N2Q8NGY6 317 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 APOBEC4Q8WW27 367 aaKnown RBP12.38□□□□□ -0.43
SCAF4-201ENST00000286835 RBM18Q96H35 190 aaKnown RBP12.38□□□□□ -0.43
SCAF4-201ENST00000286835 MRGPRX3Q96LB0 322 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 LIN7BQ9HAP6 207 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 FBXO34Q9NWN3 711 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 CENPVL1A0A0U1RR11 272 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 NARSO43776 548 aaKnown RBP12.38□□□□□ -0.43
SCAF4-201ENST00000286835 OR8G3PP0DMU2 310 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 PRKAR1BP31321 381 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 DCTDP32321 178 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 MAP2K6P52564 334 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 TAF13Q15543 124 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 GSG1Q2KHT4 349 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 CDONQ4KMG0 1287 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 PAQR7Q86WK9 346 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 LSMEM1Q8N8F7 131 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 OR2A1Q8NGT9 310 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 BRIX1Q8TDN6 353 aaKnown RBP12.38□□□□□ -0.43
SCAF4-201ENST00000286835 MS4A3Q96HJ5 214 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 TMEM185BQ9H7F4 350 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 IDSB3KWA1 339 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 SELENOFO60613 162 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 DBIP07108 87 aaKnown RBP12.38□□□□□ -0.43
SCAF4-201ENST00000286835 ITPKBP27987 946 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 RPS27P42677 84 aaKnown RBP12.38□□□□□ -0.43
SCAF4-201ENST00000286835 ART1P52961 327 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 LIMK1P53667 647 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 FUT5Q11128 374 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 Q6ZTK2 550 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 ZNF511Q8NB15 262 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 OR2T4Q8NH00 348 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 SFXN5Q8TD22 340 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 ST8SIA4Q92187 359 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 LMF1Q96S06 567 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 LHX9Q9NQ69 397 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 ABRACLQ9P1F3 81 aa12.38□□□□□ -0.43
SCAF4-201ENST00000286835 TRAV18A0A075B6X5 111 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 A0A0A6YYD5 115 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ECDO95905 644 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 EPPINO95925 133 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ANKRD34CP0C6C1 535 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 EPXP11678 715 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 PVRP15151 417 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 PUDPQ08623 228 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 METRNLQ641Q3 311 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ZNF761Q86XN6 746 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ARIH2OSQ8N7S6 290 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 SGTBQ96EQ0 304 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ZNF471Q9BX82 626 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 APOBEC3BQ9UH17 382 aaKnown RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ADAM29Q9UKF5 820 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 CAMK2AQ9UQM7 478 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 LAMA2P24043 3122 aaKnown RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ATP1B1P05026 303 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ACSM4P0C7M7 580 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 TYRP1P17643 537 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 GRK6P43250 576 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 RNLSQ5VYX0 342 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 C17orf107Q6ZR85 190 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 PDZD9Q8IXQ8 264 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 PRSS58Q8IYP2 241 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 OR2L3Q8NG85 312 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 CNOT9Q92600 299 aaKnown RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 NSMAFQ92636 917 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 DVL3Q92997 716 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 PEX11GQ96HA9 241 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 RAB11FIP5Q9BXF6 653 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ZFP64Q9NPA5 681 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 PLEKHA6Q9Y2H5 1048 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 TP53BP1Q12888 1972 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 HIST1H2ABP04908 130 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 TRA2BP62995 288 aaKnown RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ARHGAP11AQ6P4F7 1023 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 LEG1Q6P5S2 330 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 HIST3H2AQ7L7L0 130 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 KIAA0907Q7Z7F0 614 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 RELL2Q8NC24 303 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 TOR1AIP2Q8NFQ8 470 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ZNF563Q8TA94 476 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 HIST1H2ACQ93077 130 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 TSPAN10Q9H1Z9 355 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 GHITMQ9H3K2 345 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 HRASLSQ9HDD0 168 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 FBXO9Q9UK97 447 aaPredicted RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 V9GY05 133 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 hCG_1807616A0A1W2PRN6 198 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 H7C1C5 153 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 RNGTTO60942 597 aaKnown RBP12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ADH1BP00325 375 aa12.37□□□□□ -0.43
SCAF4-201ENST00000286835 ZNF35P13682 527 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms