RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ACRP10323 421 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 GIPRP48546 466 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 EMP2P54851 167 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 RPL22L1Q6P5R6 122 aaKnown RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 RNF141Q8WVD5 230 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 IKZF4Q9H2S9 585 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 INTS1Q8N201 2190 aaKnown RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 A0A0D9SEW6 157 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SDC3O75056 442 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF888P0CJ79 500 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SLC35E2BP0CK96 405 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 GATMP50440 423 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SLC35A2P78381 396 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 PXT1Q8NFP0 134 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.18□□□□□ -1.15e-7■■■■□ 25.6
NIPBL-201ENST00000282516 SLC22A11Q9NSA0 550 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 INTS6Q9UL03 887 aaKnown RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 A0A1W2PQ09 198 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 NUDT19A8MXV4 375 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SPINT2O43291 252 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 CPOXP36551 454 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 RING1Q06587 406 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 MAP4K2Q12851 820 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 GPR17Q13304 367 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 LSAMPQ13449 338 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 KCNJ8Q15842 424 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 Q6ZVL8 140 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 FAM122BQ7Z309 247 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 GIMAP1Q8WWP7 306 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 TRIB1Q96RU8 372 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 BARX1Q9HBU1 254 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 EMC7Q9NPA0 242 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 UFSP2Q9NUQ7 469 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 TRAPPC2LQ9UL33 140 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 MYOCOSA0A1B0GUC4 107 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 A0A1W2PQU0 124 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 KIR2DL3P43628 341 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SLC7A9P82251 487 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 CDCA2Q69YH5 1023 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 LBX2Q6XYB7 198 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 KCNRGQ8N5I3 272 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 NECTIN4Q96NY8 510 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF230Q9UIE0 474 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 XRN1Q8IZH2 1706 aaKnown RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 BET1O15155 118 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 CNIH1O95406 144 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 FBXO45P0C2W1 286 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 GALNT1Q10472 559 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 GLYR1Q49A26 553 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SLC46A3Q7Z3Q1 461 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SLC6A20Q9NP91 592 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SPO11Q9Y5K1 396 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 STYXL1Q9Y6J8 313 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 CBY3A6NI87 242 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 NRP1O14786 923 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 TIMM8AO60220 97 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF217O75362 1048 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 FAM57BQ71RH2 274 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 CPNE8Q86YQ8 564 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 RNF175Q8N4F7 328 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 ZNF454Q8N9F8 522 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 CDS1Q92903 461 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 C1QTNF2Q9BXJ5 285 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 METTL17Q9H7H0 456 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 RFXAPO00287 272 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SCGB1C2P0DMR2 95 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 KCNE1P15382 129 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 GDF1P27539 372 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 RFC3P40938 356 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 HHEXQ03014 270 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 CLINT1Q14677 625 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 ESPNLQ6ZVH7 1005 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 OR52H1Q8NGJ2 320 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 KCNG3Q8TAE7 436 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 SALL4Q9UJQ4 1053 aa8.18□□□□□ -1.1
NIPBL-201ENST00000282516 FAM208AQ9UK61 1670 aaKnown RBP8.18□□□□□ -1.1
NIPBL-201ENST00000282516 METTL15A6NJ78 407 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SLC43A1O75387 559 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 LAMP1P11279 417 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 LGALS4P56470 323 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 PDE7AQ13946 482 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SLC35F3Q8IY50 421 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SECTM1Q8WVN6 248 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 UCN3Q969E3 161 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 L3HYPDHQ96EM0 354 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 C4orf36Q96KX1 117 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 GPR32O75388 356 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 HAPLN1P10915 354 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ABOP16442 354 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 IDUAP35475 653 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SORDQ00796 357 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 DMWDQ09019 674 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 SELPLGQ14242 412 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 C6orf89Q6UWU4 347 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 WDR5BQ86VZ2 330 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 CYB561A3Q8NBI2 242 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 ATF6BQ99941 703 aa8.17□□□□□ -1.1
NIPBL-201ENST00000282516 EXOSC3Q9NQT5 275 aaKnown RBP8.17□□□□□ -1.1
NIPBL-201ENST00000282516 AGPAT4Q9NRZ5 378 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms