RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 CXCR1P25024 350 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 MAP2K6P52564 334 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 NKX6-1P78426 367 aaPredicted RBP12.75□□□□□ -0.37
HMGN3-201ENST00000275036 CDK6Q00534 326 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 P2RY6Q15077 328 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 ZSWIM7Q19AV6 140 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 GLIPR1L2Q4G1C9 344 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 ALKBH2Q6NS38 261 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 CGB2Q6NT52 195 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 REEP3Q6NUK4 255 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 BHLHA15Q7RTS1 189 aaPredicted RBP12.75□□□□□ -0.37
HMGN3-201ENST00000275036 DPP10Q8N608 796 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 PIGXQ8TBF5 258 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 KISS1RQ969F8 398 aaPredicted RBP12.75□□□□□ -0.37
HMGN3-201ENST00000275036 PLPPR2Q96GM1 343 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 TMEM204Q9BSN7 226 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 HDHD5Q9BXW7 423 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 POTEKPQ9BYX7 375 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 RABEP2Q9H5N1 569 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 EMC3Q9P0I2 261 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 LEF1Q9UJU2 399 aaPredicted RBP12.75□□□□□ -0.37
HMGN3-201ENST00000275036 NOSIPQ9Y314 301 aaKnown RBP12.75□□□□□ -0.37
HMGN3-201ENST00000275036 ZANQ9Y493 2812 aa12.75□□□□□ -0.37
HMGN3-201ENST00000275036 LIPT2A6NK58 231 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 NPIPB7O75200 414 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 COX5AP20674 150 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 HTR2AP28223 471 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 ADSLP30566 484 aaPredicted RBP12.74□□□□□ -0.37
HMGN3-201ENST00000275036 PRKAR1BP31321 381 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 FOXG1P55316 489 aaPredicted RBP12.74□□□□□ -0.37
HMGN3-201ENST00000275036 COPZ1P61923 177 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 SLC35A1P78382 337 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 SF3A3Q12874 501 aaKnown RBP eCLIP12.74□□□□□ -0.37
HMGN3-201ENST00000275036 CEACAM7Q14002 265 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 SCARB2Q14108 478 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 OR7A5Q15622 319 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 ZNF704Q6ZNC4 412 aaPredicted RBP12.74□□□□□ -0.37
HMGN3-201ENST00000275036 DHDDSQ86SQ9 333 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 PTOV1Q86YD1 416 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 ZNF100Q8IYN0 542 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 TMEM99Q8N816 258 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 LILRB1Q8NHL6 650 aaPredicted RBP12.74□□□□□ -0.37
HMGN3-201ENST00000275036 CCL19Q99731 98 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 PIP5K1AQ99755 562 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 WFDC6Q9BQY6 131 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 SIKE1Q9BRV8 207 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 TMEM120AQ9BXJ8 343 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 TMEM38AQ9H6F2 299 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 FGFR1OP2Q9NVK5 253 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 PRDM4Q9UKN5 801 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 TRIM33Q9UPN9 1127 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 NDUFAF1Q9Y375 327 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 FLVCR1Q9Y5Y0 555 aa12.74□□□□□ -0.37
HMGN3-201ENST00000275036 NIPBLQ6KC79 2804 aaeCLIP12.74□□□□□ -0.37
HMGN3-201ENST00000275036 EVPLLA8MZ36 301 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 FBP2O00757 339 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 EIF1BO60739 113 aaKnown RBP12.73□□□□□ -0.37
HMGN3-201ENST00000275036 AKR7A3O95154 331 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 AQP1P29972 269 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 IDUAP35475 653 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 P2RY4P51582 365 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 MTPNP58546 118 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 EGR4Q05215 589 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 SLC17A1Q14916 467 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 Q5PR19 223 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 FBXW9Q5XUX1 488 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 DHRS4L2Q6PKH6 230 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 PAQR6Q6TCH4 344 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 LRRC75A-AS1Q8N1F1 130 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 CIARTQ8N365 385 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-201ENST00000275036 ZNF433Q8N7K0 673 aaPredicted RBP12.73□□□□□ -0.37
HMGN3-201ENST00000275036 SLC35B4Q969S0 331 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 APH1AQ96BI3 265 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 ANKRD27Q96NW4 1050 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 CGREF1Q99674 301 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 PRR14Q9BWN1 585 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 ARMC7Q9H6L4 198 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 CACYBPQ9HB71 228 aaKnown RBP12.73□□□□□ -0.37
HMGN3-201ENST00000275036 CORO2BQ9UQ03 480 aa12.73□□□□□ -0.37
HMGN3-201ENST00000275036 AQP7P3A6NL99 342 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 A8MVM7 634 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 GPR171O14626 319 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 ANGPT2O15123 496 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 SMPD2O60906 423 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 CNOT4O95628 575 aaKnown RBP12.72□□□□□ -0.37
HMGN3-201ENST00000275036 GPIP06744 558 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 HOXB4P17483 251 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-201ENST00000275036 SLC6A2P23975 617 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 NR1H2P55055 460 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 PCBP3P57721 371 aaKnown RBP12.72□□□□□ -0.37
HMGN3-201ENST00000275036 DMTNQ08495 405 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 CAPRIN1Q14444 709 aaKnown RBP12.72□□□□□ -0.37
HMGN3-201ENST00000275036 NCMAPQ5T1S8 102 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 OTUD3Q5T2D3 398 aaPredicted RBP12.72□□□□□ -0.37
HMGN3-201ENST00000275036 C1orf140Q5VVS0 124 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 METTL21CQ5VZV1 264 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 C20orf204Q6ZNR8 217 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 ZIC4Q8N9L1 334 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 OR52E4Q8NGH9 312 aa12.72□□□□□ -0.37
HMGN3-201ENST00000275036 TSPEARQ8WU66 669 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms