RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 C3orf38Q5JPI3 329 aa14.28□□□□□ -0.12
TIMP3-201ENST00000266085 OR7G1Q8NGA0 311 aa14.28□□□□□ -0.12
TIMP3-201ENST00000266085 OR5D14Q8NGL3 314 aa14.28□□□□□ -0.12
TIMP3-201ENST00000266085 TM9SF4Q92544 642 aa14.28□□□□□ -0.12
TIMP3-201ENST00000266085 ITFG2Q969R8 447 aa14.28□□□□□ -0.12
TIMP3-201ENST00000266085 KCNS2Q9ULS6 477 aa14.28□□□□□ -0.12
TIMP3-201ENST00000266085 SPTY2D1-AS1A0A0U1RR47 76 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 FGF17O60258 216 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 HTR3BO95264 441 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 IGHEP01854 428 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 RAB3AP20336 220 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 ERP29P30040 261 aaKnown RBP14.27□□□□□ -0.12
TIMP3-201ENST00000266085 SLC1A3P43003 542 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 CRMP1Q14194 572 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 ZNF385BQ569K4 471 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 GDF7Q7Z4P5 450 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 SLC35F3Q8IY50 421 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 RPL3LQ92901 407 aaKnown RBP14.27□□□□□ -0.12
TIMP3-201ENST00000266085 ELOVL3Q9HB03 270 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 MYEF2Q9P2K5 600 aaKnown RBP14.27□□□□□ -0.12
TIMP3-201ENST00000266085 RASD1Q9Y272 281 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 I3L521 148 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 UPK1BO75841 260 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 HOXB9P17482 250 aaPredicted RBP14.27□□□□□ -0.12
TIMP3-201ENST00000266085 FPR3P25089 353 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 SSR4P51571 173 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 HTR4Q13639 388 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 ADAMTS14Q8WXS8 1223 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 STACQ99469 402 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 C19orf53Q9UNZ5 99 aaPredicted RBP14.27□□□□□ -0.12
TIMP3-201ENST00000266085 PCDHGA3Q9Y5H0 932 aa14.27□□□□□ -0.12
TIMP3-201ENST00000266085 F5H0A9 414 aaPredicted RBP14.27□□□□□ -0.13
TIMP3-201ENST00000266085 CRTAPO75718 401 aaPredicted RBP14.27□□□□□ -0.13
TIMP3-201ENST00000266085 F10P00742 488 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 GFERP55789 205 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 ELAVL1Q15717 326 aaKnown RBP14.27□□□□□ -0.13
TIMP3-201ENST00000266085 PCGF3Q3KNV8 242 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 BEND4Q6ZU67 534 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 ALG12Q9BV10 488 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 ENKD1Q9H0I2 346 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 MED20Q9H944 212 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 SLC25A37Q9NYZ2 338 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 CD46P15529 392 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 CAPZBP47756 277 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 MELKQ14680 651 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 VWA2Q5GFL6 755 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 NXNL2Q5VZ03 156 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 RPL22L1Q6P5R6 122 aaKnown RBP14.27□□□□□ -0.13
TIMP3-201ENST00000266085 LINC00696Q6ZRV3 163 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 SPAG16Q8N0X2 631 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 OR5H2Q8NGV7 314 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 TMEM255BQ8WV15 326 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 ASB17Q8WXJ9 295 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 CNOT9Q92600 299 aaKnown RBP14.27□□□□□ -0.13
TIMP3-201ENST00000266085 SLC41A2Q96JW4 573 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 WSB2Q9NYS7 404 aaPredicted RBP14.27□□□□□ -0.13
TIMP3-201ENST00000266085 PPIL1Q9Y3C6 166 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 CORINQ9Y5Q5 1042 aa14.27□□□□□ -0.13
TIMP3-201ENST00000266085 MCCD1P59942 119 aaPredicted RBP14.26□□□□□ -0.13
TIMP3-201ENST00000266085 GNMTQ14749 295 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 TCTN1Q2MV58 587 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 PRSS36Q5K4E3 855 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 CMIPQ8IY22 773 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 BEST3Q8N1M1 668 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 RHOXF1Q8NHV9 184 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 SLC7A13Q8TCU3 470 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 MUL1Q969V5 352 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 NAA50Q9GZZ1 169 aaKnown RBP14.26□□□□□ -0.13
TIMP3-201ENST00000266085 OR10A2Q9H208 303 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 WASH6PQ9NQA3 447 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 EMC3Q9P0I2 261 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 NID1P14543 1247 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 EPHA4P54764 986 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 C3P1Q6ZMU1 363 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 ENTHD1Q8IYW4 607 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 OR1J4Q8NGS1 313 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 TMEM72A0PK05 275 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 RP2O75695 350 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 OR2T7P0C7T2 308 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 OR8G3PP0DMU2 310 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 MRPS10P82664 201 aaKnown RBP14.26□□□□□ -0.13
TIMP3-201ENST00000266085 DEFA5Q01523 94 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 ZMYND11Q15326 602 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 KDM4DQ6B0I6 523 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 SERPINA12Q8IW75 414 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 OR2T27Q8NH04 317 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 EID2BQ96D98 161 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 UTP23Q9BRU9 249 aaKnown RBP14.26□□□□□ -0.13
TIMP3-201ENST00000266085 ENY2Q9NPA8 101 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 MOKQ9UQ07 419 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 GMEB1Q9Y692 573 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 LOC102725191A0A1B0GVB3 256 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 IDSB3KWA1 339 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 FXYD1O00168 92 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 ARHGAP33O14559 1287 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 TSPAN9O75954 239 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 NSA2O95478 260 aaKnown RBP14.26□□□□□ -0.13
TIMP3-201ENST00000266085 AKR1C4P17516 323 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 NPR2P20594 1047 aa14.26□□□□□ -0.13
TIMP3-201ENST00000266085 TEAD1P28347 426 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms