RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 CLRN3Q8NCR9 226 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 BBS1Q8NFJ9 593 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 OR5D16Q8NGK9 328 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 TSACCQ96A04 125 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 SMIM10Q96HG1 83 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 MS4A4EQ96PG1 132 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 NDC1Q9BTX1 674 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 TTYH1Q9H313 450 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 GPN1Q9HCN4 374 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 HRASLSQ9HDD0 168 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 POLMQ9NP87 494 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 KLHL28Q9NXS3 571 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 USP36Q9P275 1121 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 MGAT4CQ9UBM8 478 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 CHST2Q9Y4C5 530 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 A0A1B0GW55 424 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 GLOD5A6NK44 160 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 C10orf142B7Z368 130 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 CHRM4P08173 479 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 ZNF888P0CJ79 500 aaPredicted RBP9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 DUX4L2P0CJ85 424 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 DUX4L3P0CJ86 424 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 DUX4L4P0CJ87 422 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 DUX4L5P0CJ88 424 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 DUX4L6P0CJ89 424 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 DUX4L7P0CJ90 424 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 GABRG2P18507 467 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 DRD5P21918 477 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 CD96P40200 585 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 NRG3P56975 720 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 MLLT1Q03111 559 aaPredicted RBP9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 COL19A1Q14993 1142 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 NIPAL3Q6P499 406 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 ZC3H14Q6PJT7 736 aaKnown RBP9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 FIGLAQ6QHK4 219 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 ARL9Q6T311 187 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 MBOAT2Q6ZWT7 520 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 PDZD9Q8IXQ8 264 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 OR4K14Q8NGD5 310 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 FLVCR1-AS1Q8TAF5 88 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 GPBAR1Q8TDU6 330 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 THAP4Q8WY91 577 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 RERGQ96A58 199 aaPredicted RBP9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 OR2A5Q96R48 311 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 OR7D2Q96RA2 312 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 ZFYVE21Q9BQ24 234 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 YIPF4Q9BSR8 244 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 C1QTNF6Q9BXI9 259 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 KCNK12Q9HB15 430 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 SEMA4GQ9NTN9 838 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 TAS2R5Q9NYW4 299 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 DUX4Q9UBX2 424 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 ZMAT5Q9UDW3 170 aaKnown RBP9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 CD207Q9UJ71 328 aa9.96□□□□□ -0.81
CHRNA1-201ENST00000261007 D6RAR5 112 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 SUSD5O60279 629 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 SELENOFO60613 162 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 REM1O75628 298 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 AQP8O94778 261 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 EML2O95834 649 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 HIST1H2ABP04908 130 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 EPXP11678 715 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 GABRA1P14867 456 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 MAPK3P27361 379 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 PRKAR1BP31321 381 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 LTBRP36941 435 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 PSMA6P60900 246 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 SEC61A1P61619 476 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 S100A12P80511 92 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 ETFDHQ16134 617 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 ACSM3Q53FZ2 586 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 UBE2NLQ5JXB2 153 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 KIAA0895LQ68EN5 471 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 FBXO42Q6P3S6 717 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 TMEM92Q6UXU6 159 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 Q6ZSR6 202 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 USP53Q70EK8 1073 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 HIST3H2AQ7L7L0 130 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 MEX3DQ86XN8 651 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 MCATQ8IVS2 390 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 AVL9Q8NBF6 648 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 BRIX1Q8TDN6 353 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 ADAMTS15Q8TE58 950 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 HIST1H2ACQ93077 130 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 C10orf90Q96M02 699 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 NPAS1Q99742 590 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 MS4A7Q9GZW8 240 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 EVA1AQ9H8M9 152 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 KRCC1Q9NPI7 259 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 CTPS2Q9NRF8 586 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 PILRAQ9UKJ1 303 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 COPS3Q9UNS2 423 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 MRPS7Q9Y2R9 242 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 NINQ8N4C6 2090 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 PRR23D1E9PI22 279 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 H0Y8X5 98 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 GABARAPH6UMI1 98 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 DNASE2O00115 360 aaPredicted RBP9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 SULT1B1O43704 296 aa9.95□□□□□ -0.82
CHRNA1-201ENST00000261007 PRKRAO75569 313 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms