RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ZNF285Q96NJ3 590 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 PIGQQ9BRB3 760 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 DPCDQ9BVM2 203 aaPredicted RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 EIF5A2Q9GZV4 153 aaKnown RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 TM7SF3Q9NS93 570 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 SIDT1Q9NXL6 827 aaKnown RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 TMED7Q9Y3B3 224 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 ATG4BQ9Y4P1 393 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 F5H5P2 479 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 ABOP16442 354 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 GABRA5P31644 462 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 LILRA3Q8N6C8 439 aaPredicted RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 SGCZQ96LD1 299 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 MYEF2Q9P2K5 600 aaKnown RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 CEPT1Q9Y6K0 416 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 A0A0A6YYH2 397 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 A6NJ64 397 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 OPN1LWP04000 364 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 GLULP15104 373 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 LEXMQ3ZCV2 418 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 OTUD1Q5VV17 481 aaPredicted RBP17.61■□□□□ 0.41
PTPRE-201ENST00000254667 DPY19L2P2Q6ZN68 376 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 MAVSQ7Z434 540 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 SLC37A2Q8TED4 501 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 GLYATL2Q8WU03 294 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 MUCL1Q96DR8 90 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 NGBQ9NPG2 151 aa17.61■□□□□ 0.41
PTPRE-201ENST00000254667 COL22A1Q8NFW1 1626 aaPredicted RBP17.6■□□□□ 0.41
PTPRE-201ENST00000254667 MYO9BQ13459 2157 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 A0A1B0GWA3 101 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 IL32P24001 234 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 FPR3P25089 353 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 RNF128Q8TEB7 428 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 HRASLS5Q96KN8 279 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 OR8U9P0C7N5 309 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 LIM2P55344 173 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 RAB31Q13636 194 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 CCSMST1Q4G0I0 132 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 ALG12Q9BV10 488 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 PAPOLGQ9BWT3 736 aaKnown RBP17.6■□□□□ 0.41
PTPRE-201ENST00000254667 ZDHHC5Q9C0B5 715 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 PAHP00439 452 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 PRKACBP22694 351 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 SMAD4Q13485 552 aaKnown RBP17.6■□□□□ 0.41
PTPRE-201ENST00000254667 NIPAL3Q6P499 406 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 LILRB2Q8N423 598 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 OLIG1Q8TAK6 271 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 NIPAL2Q9H841 368 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 B3GALT1Q9Y5Z6 326 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 H7C2Y5 167 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 ADAM23O75077 832 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 ITGB2P05107 769 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 DPP4P27487 766 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 OR2T35Q8NGX2 323 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 MUL1Q969V5 352 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 TNFRSF13CQ96RJ3 184 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 SLC6A17Q9H1V8 727 aa17.6■□□□□ 0.41
PTPRE-201ENST00000254667 CXorf51AA0A1B0GTR3 108 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 LRIT2A6NDA9 550 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 NOTOA8MTQ0 251 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 TRAPPC2LH3BP13 241 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 GABRPO00591 440 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 P2RX6O15547 441 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 ALOX12BO75342 701 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 CAMLGP49069 296 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 TAS2R19P59542 299 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 NKAIN2Q5VXU1 208 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 TMEM207Q6UWW9 146 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 VASH1Q7L8A9 365 aaPredicted RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 TSNAXQ99598 290 aaKnown RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 NXF5Q9H1B4 397 aaKnown RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 PLPP1O14494 284 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 ETV6P41212 452 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 RPP30P78346 268 aaKnown RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 UBE2UQ5VVX9 321 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 FRMD1Q8N878 549 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 OR1J2Q8NGS2 313 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 ITFG2Q969R8 447 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 EMC9Q9Y3B6 208 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 TMEM184BQ9Y519 407 aaPredicted RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 ZNF593O00488 134 aaPredicted RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 GAPDHSO14556 408 aaPredicted RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 ELAVL4P26378 380 aaKnown RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 ZNF616Q08AN1 781 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 SLC22A6Q4U2R8 563 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 TMEM178AQ8NBL3 297 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 NICN1Q9BSH3 213 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 QRSL1Q9H0R6 528 aaKnown RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 CXXC1Q9P0U4 656 aaPredicted RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 AKAP11Q9UKA4 1901 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 CLDN17P56750 224 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 METAP1DQ6UB28 335 aaPredicted RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 MOB3CQ70IA8 216 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 TMEM102Q8N9M5 508 aaPredicted RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 IL17RDQ8NFM7 739 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 METTL9Q9H1A3 318 aa17.59■□□□□ 0.41
PTPRE-201ENST00000254667 UBE2ZQ9H832 354 aaPredicted RBP17.59■□□□□ 0.41
PTPRE-201ENST00000254667 EIF4E2O60573 245 aaKnown RBP17.58■□□□□ 0.41
PTPRE-201ENST00000254667 DCNP07585 359 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms