RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 HS3ST6Q96QI5 342 aa20.33■□□□□ 0.85
LSM4-201ENST00000252816 ZNF607Q96SK3 696 aa20.33■□□□□ 0.85
LSM4-201ENST00000252816 WFDC6Q9BQY6 131 aa20.33■□□□□ 0.85
LSM4-201ENST00000252816 PRR14Q9BWN1 585 aa20.33■□□□□ 0.85
LSM4-201ENST00000252816 OR10A4Q9H209 315 aa20.33■□□□□ 0.85
LSM4-201ENST00000252816 KLHL14Q9P2G3 628 aa20.33■□□□□ 0.85
LSM4-201ENST00000252816 ANGPT4Q9Y264 503 aa20.33■□□□□ 0.85
LSM4-201ENST00000252816 TEP1Q99973 2627 aaKnown RBP20.32■□□□□ 0.84
LSM4-201ENST00000252816 A8MVM7 634 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 FXYD1O00168 92 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 KLF4O43474 513 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 EIF1BO60739 113 aaKnown RBP20.32■□□□□ 0.84
LSM4-201ENST00000252816 NPIPB7O75200 414 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 MFN2O95140 757 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 RBBP4Q09028 425 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 P2RY6Q15077 328 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 OR7A5Q15622 319 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 PAQR6Q6TCH4 344 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 ZNF100Q8IYN0 542 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 STEAP2Q8NFT2 490 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 C10orf82Q8WW14 230 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 HDHD5Q9BXW7 423 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 NOSIPQ9Y314 301 aaKnown RBP20.32■□□□□ 0.84
LSM4-201ENST00000252816 F8P00451 2351 aa20.32■□□□□ 0.84
LSM4-201ENST00000252816 MAP1AP78559 2803 aaPredicted RBP20.32■□□□□ 0.84
LSM4-201ENST00000252816 SERPINB7O75635 380 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 GPIP06744 558 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 DNASE1P24855 282 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 ADSLP30566 484 aaPredicted RBP20.31■□□□□ 0.84
LSM4-201ENST00000252816 GZMMP51124 257 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 C1orf140Q5VVS0 124 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 NANOGP8Q6NSW7 305 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 SNX32Q86XE0 403 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 WFDC8Q8IUA0 241 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 ARMC8Q8IUR7 673 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 TMEM99Q8N816 258 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 LSMEM1Q8N8F7 131 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 SMYD1Q8NB12 490 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 OR10A6Q8NH74 314 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 KISS1RQ969F8 398 aaPredicted RBP20.31■□□□□ 0.84
LSM4-201ENST00000252816 NAA11Q9BSU3 229 aaPredicted RBP20.31■□□□□ 0.84
LSM4-201ENST00000252816 NANOGQ9H9S0 305 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 MRGBPQ9NV56 204 aa20.31■□□□□ 0.84
LSM4-201ENST00000252816 A0A1B0GWA3 101 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 PRORSD1PA6NEY8 169 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 GPR171O14626 319 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 AKR7A3O95154 331 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 ATE1O95260 518 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 IGHV3-9P01782 118 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 IL32P24001 234 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 EGR4Q05215 589 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 ITGADQ13349 1161 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 SLC17A1Q14916 467 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 COQ5Q5HYK3 327 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 OTUD3Q5T2D3 398 aaPredicted RBP20.3■□□□□ 0.84
LSM4-201ENST00000252816 REP15Q6BDI9 236 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 C6orf89Q6UWU4 347 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 SPNS3Q6ZMD2 512 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 LRRC58Q96CX6 371 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 ADPRHL2Q9NX46 363 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 FLVCR1Q9Y5Y0 555 aa20.3■□□□□ 0.84
LSM4-201ENST00000252816 LOC100653049A0A140TA62 436 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.29■□□□□ 0.84
LSM4-201ENST00000252816 M0QX08 132 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 MRASO14807 208 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 TPST2O60704 377 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 LYZL6O75951 148 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 KRT34O76011 436 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 OPN1SWP03999 348 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 RAF1P04049 648 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 IGHV1-2P23083 117 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 PCGF2P35227 344 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 P2RY4P51582 365 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 CYLC2Q14093 348 aaPredicted RBP20.29■□□□□ 0.84
LSM4-201ENST00000252816 MMEL1Q495T6 779 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 RABL3Q5HYI8 236 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 BHLHA15Q7RTS1 189 aaPredicted RBP20.29■□□□□ 0.84
LSM4-201ENST00000252816 BHLHE22Q8NFJ8 381 aaPredicted RBP20.29■□□□□ 0.84
LSM4-201ENST00000252816 OR52E4Q8NGH9 312 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 STK35Q8TDR2 534 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 APH1AQ96BI3 265 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 FOXC2Q99958 501 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 PTDSS2Q9BVG9 487 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 PIF1Q9H611 641 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 RPS6KB2Q9UBS0 482 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 EDARQ9UNE0 448 aa20.29■□□□□ 0.84
LSM4-201ENST00000252816 PRRC2AP48634 2157 aaKnown RBP20.29■□□□□ 0.84
LSM4-201ENST00000252816 ROS1P08922 2347 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 AQP7P3A6NL99 342 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 ELOA3DA6NLF2 546 aaPredicted RBP20.28■□□□□ 0.84
LSM4-201ENST00000252816 CNOT4O95628 575 aaKnown RBP20.28■□□□□ 0.84
LSM4-201ENST00000252816 COX5AP20674 150 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 RGS8P57771 180 aaPredicted RBP20.28■□□□□ 0.84
LSM4-201ENST00000252816 KEAP1Q14145 624 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 MAPRE2Q15555 327 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 TAB1Q15750 504 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 DUSP7Q16829 419 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 ELOA3BQ3SY89 546 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 BEX5Q5H9J7 111 aa20.28■□□□□ 0.84
LSM4-201ENST00000252816 FBXW9Q5XUX1 488 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms