RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PCP4L1A6NKN8 68 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 HMGN4O00479 90 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 SNAPINO95295 136 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 DUSP3P51452 185 aaPredicted RBP3.84□□□□□ -1.8
UBE4A-201ENST00000252108 ADAM8P78325 824 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 IL10RAQ13651 578 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF234Q14588 700 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 ARL6IP1Q15041 203 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 PLA1AQ53H76 456 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 AGBL4Q5VU57 503 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 METRNLQ641Q3 311 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF425Q6IV72 752 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 PLBD1Q6P4A8 553 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 DNM1P34Q6PK57 102 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 ENPP7Q6UWV6 458 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF793Q6ZN11 406 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 USP53Q70EK8 1073 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 UTS2BQ765I0 119 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 GPR135Q8IZ08 494 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 PHYHIPLQ96FC7 376 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 MAP6Q96JE9 813 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 SAMD8Q96LT4 415 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 F2RL3Q96RI0 385 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 TIMM29Q9BSF4 260 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 PLEKHA1Q9HB21 404 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 IFT46Q9NQC8 304 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 SLC17A5Q9NRA2 495 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 NDRG3Q9UGV2 375 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 POLR1DQ9Y2S0 133 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF281Q9Y2X9 895 aa3.84□□□□□ -1.8
UBE4A-201ENST00000252108 M0R129 80 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 IMPA2O14732 288 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR10H2O60403 315 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SRPX2O60687 465 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR2F2O95006 317 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CXCL14O95715 111 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PMS2P2O95744 297 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 HNRNPA1P09651 372 aaKnown RBP eCLIP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CSF2RAP15509 400 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SSTR4P31391 388 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 AKR1D1P51857 326 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR2F1Q13607 317 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 LEXMQ3ZCV2 418 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 RAB12Q6IQ22 244 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 NIPAL3Q6P499 406 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 KLHL24Q6TFL4 600 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF614Q8N883 585 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 AMER3Q8N944 861 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PIGKQ92643 395 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 FOXRED1Q96CU9 486 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 AMDHD1Q96NU7 426 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR7D2Q96RA2 312 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF587Q96SQ5 575 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 TSNAXQ99598 290 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 DEC1Q9P2X7 70 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ERVK-19Q9WJR5 959 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SPEGQ15772 3267 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 A0A0G2JMP0 313 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 C9J4A7 227 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 FAM227AF5H4B4 570 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 GMDSO60547 372 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ALDOBP05062 364 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 C8AP07357 584 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 UBL4AP11441 157 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SLC6A11P48066 632 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CASP9P55211 416 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 TAS2R19P59542 299 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SEC61A1P61619 476 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 DEFA5Q01523 94 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 PRAMEF17Q5VTA0 474 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 AADACL4Q5VUY2 407 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OVCH2Q7RTZ1 564 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 GLB1L2Q8IW92 636 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SLC35F2Q8IXU6 374 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF676Q8N7Q3 588 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR4M2Q8NGB6 313 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 OR1J4Q8NGS1 313 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 COQ8AQ8NI60 647 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 STOML3Q8TAV4 291 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 RIT1Q92963 219 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SIPA1Q96FS4 1042 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SERINC2Q96SA4 455 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 STACQ99469 402 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 MFFQ9GZY8 342 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 METTL17Q9H7H0 456 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF107Q9UII5 783 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SH3BGRL2Q9UJC5 107 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CFAP54Q96N23 3096 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 A0A087WUU8 490 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 LOC105369274A0A096LPK9 316 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 D6RAR5 112 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 AIPO00170 330 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 XKRYO14609 159 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 HYAL3O43820 417 aaPredicted RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 SDC3O75056 442 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 MTX2O75431 263 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 CH25HO95992 272 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 ASGR2P07307 311 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 LIMS3P0CW19 117 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 LIMS4P0CW20 117 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms