RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 RPL22L1Q6P5R6 122 aaKnown RBP12.01□□□□□ -0.49
VAMP4-201ENST00000236192 KCNIP4Q6PIL6 250 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 CALHM3Q86XJ0 350 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 SLC35F2Q8IXU6 374 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 RASL12Q9NYN1 266 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 LTN1O94822 1766 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 HPP00738 406 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 PRR35P0CG20 571 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 LILRA4P59901 499 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 AP1S1P61966 158 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 FKBP1AP62942 108 aaKnown RBP12.01□□□□□ -0.49
VAMP4-201ENST00000236192 RELQ04864 619 aaPredicted RBP12.01□□□□□ -0.49
VAMP4-201ENST00000236192 SMAD2Q15796 467 aaKnown RBP12.01□□□□□ -0.49
VAMP4-201ENST00000236192 MANEALQ5VSG8 457 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 CLDN19Q8N6F1 224 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 HUS1BQ8NHY5 278 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 MTMR11A4FU01 709 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 ZNF726A6NNF4 738 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 GPR37O15354 613 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 GPRIN2O60269 458 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 IGF2P01344 180 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 SERPINA5P05154 406 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 PCCBP05166 539 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 ADRB3P13945 408 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 CTSCP53634 463 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 PPIAP62937 165 aaKnown RBP12.01□□□□□ -0.49
VAMP4-201ENST00000236192 TMEM207Q6UWW9 146 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 SCGB1C1Q8TD33 95 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 THEM6Q8WUY1 208 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 NUDT8Q8WV74 236 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 GCDHQ92947 438 aaPredicted RBP12.01□□□□□ -0.49
VAMP4-201ENST00000236192 ECHDC3Q96DC8 303 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 PACRGQ96M98 296 aaPredicted RBP12.01□□□□□ -0.49
VAMP4-201ENST00000236192 LGALS2P05162 132 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 ACAA1P09110 424 aaPredicted RBP12.01□□□□□ -0.49
VAMP4-201ENST00000236192 PRSS56P0CW18 603 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 GSK3AP49840 483 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 TOMM34Q15785 309 aaPredicted RBP12.01□□□□□ -0.49
VAMP4-201ENST00000236192 PHYHIPQ92561 330 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 PIM2Q9P1W9 311 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 IL20RAQ9UHF4 553 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 FAM227AF5H4B4 570 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 SLC16A5O15375 505 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 MTHFD2P13995 350 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 P2RY4P51582 365 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 MAP2K5Q13163 448 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 LIPNQ5VXI9 398 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 GLB1LQ6UWU2 654 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 NHLRC1Q6VVB1 395 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 COMMD1Q8N668 190 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 HAVCR2Q8TDQ0 301 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 ZDHHC6Q9H6R6 413 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 CCSO14618 274 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 TCF21O43680 179 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 NDUFB6O95139 128 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 AKR7A3O95154 331 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 PTBP3O95758 552 aaKnown RBP12□□□□□ -0.49
VAMP4-201ENST00000236192 TSPAN31Q12999 210 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 SKP2Q13309 424 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 NSUN5P2Q63ZY6 315 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 EIF4E3Q8N5X7 224 aaKnown RBP12□□□□□ -0.49
VAMP4-201ENST00000236192 FAM181AQ8N9Y4 354 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 GRHL3Q8TE85 626 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 ADAT1Q9BUB4 502 aaKnown RBP12□□□□□ -0.49
VAMP4-201ENST00000236192 OPN3Q9H1Y3 402 aaPredicted RBP12□□□□□ -0.49
VAMP4-201ENST00000236192 SEC61A2Q9H9S3 476 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 PARPBPQ9NWS1 579 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 DHDHQ9UQ10 334 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 CHST2Q9Y4C5 530 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 POMT1Q9Y6A1 747 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 MYBPHLA2RUH7 354 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 RNF212BA8MTL3 300 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 SYT7O43581 403 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 HLA-DQB1P01920 261 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 ARAFP10398 606 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 MAKP20794 623 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 RPL29P47914 159 aaKnown RBP12□□□□□ -0.49
VAMP4-201ENST00000236192 ZNF687Q8N1G0 1237 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 MOAP1Q96BY2 351 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 PPP1R3EQ9H7J1 279 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 ANKUB1A6NFN9 424 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 CACNB4O00305 520 aaPredicted RBP12□□□□□ -0.49
VAMP4-201ENST00000236192 MBTPS2O43462 519 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 HCRTO43612 131 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 LDB2O43679 373 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 GP1BAP07359 652 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 CTSHP09668 335 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 TBXA2RP21731 343 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 PSMB6P28072 239 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 PEX11GQ96HA9 241 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 BTF3L4Q96K17 158 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 CMTM3Q96MX0 182 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 TECTBQ96PL2 329 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 FAM96BQ9Y3D0 163 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 USP3Q9Y6I4 520 aa12□□□□□ -0.49
VAMP4-201ENST00000236192 CXorf65A6NEN9 183 aa11.99□□□□□ -0.49
VAMP4-201ENST00000236192 A6NLC8 198 aa11.99□□□□□ -0.49
VAMP4-201ENST00000236192 TMEM11P17152 192 aa11.99□□□□□ -0.49
VAMP4-201ENST00000236192 GALP22466 123 aa11.99□□□□□ -0.49
VAMP4-201ENST00000236192 MPIP34949 423 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms