RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 ULK3Q6PHR2 472 aa13.13□□□□□ -0.31
PCOLCE-201ENST00000223061 RNF128Q8TEB7 428 aa13.13□□□□□ -0.31
PCOLCE-201ENST00000223061 DNAJA4Q8WW22 397 aaPredicted RBP13.13□□□□□ -0.31
PCOLCE-201ENST00000223061 ADPRHL2Q9NX46 363 aa13.13□□□□□ -0.31
PCOLCE-201ENST00000223061 A0A0B4J2E0 115 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 A0A1B0GX12 115 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 SMAD9O15198 467 aaKnown RBP13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 FMO6PO60774 539 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 SMNDC1O75940 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 PMS2P2O95744 297 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 SERPINA1P01009 418 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 IMPDH2P12268 514 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 GGT1P19440 569 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 PTNP21246 168 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 IDUAP35475 653 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 MSX2P35548 267 aaPredicted RBP13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 KIR2DL2P43627 348 aaPredicted RBP13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 CDH12P55289 794 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 ENTPD8Q5MY95 495 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 VWA1Q6PCB0 445 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 P3H2Q8IVL5 708 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 LZICQ8WZA0 190 aa13.12□□□□□ -0.31
PCOLCE-201ENST00000223061 ASH1LQ9NR48 2969 aaKnown RBP13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 ENTPD5O75356 428 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 GMNNO75496 209 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 CRHP06850 196 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 PNMTP11086 282 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 FPR1P21462 350 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 CTBP2P56545 445 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 SELENOWP63302 87 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 CEACAM7Q14002 265 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 OR7A5Q15622 319 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 C1orf140Q5VVS0 124 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 GTF2IRD2BQ6EKJ0 949 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 GLYATQ6IB77 296 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 DEF8Q6ZN54 512 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 FAM214BQ7L5A3 538 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 BTLAQ7Z6A9 289 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 VTCN1Q7Z7D3 282 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 LUZP2Q86TE4 346 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 GTF2IRD2Q86UP8 949 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 STARD4Q96DR4 205 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 ZHX1-C8orf76Q96EF9 292 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 SLC47A1Q96FL8 570 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 GMPPAQ96IJ6 420 aaPredicted RBP13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 POTEKPQ9BYX7 375 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 C12orf10Q9HB07 376 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 TRAPPC4Q9Y296 219 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 EMC9Q9Y3B6 208 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 ICE1Q9Y2F5 2266 aa13.11□□□□□ -0.31
PCOLCE-201ENST00000223061 SS18L1O75177 396 aaPredicted RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 CIB2O75838 187 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 PRKD3O94806 890 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 AHSA1O95433 338 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 HSD17B1P14061 328 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 ASCL1P50553 236 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 SLC35A1P78382 337 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 TFF3Q07654 80 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 RNPS1Q15287 305 aaKnown RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 GUSBP1Q15486 140 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 EEF1A1P5Q5VTE0 462 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 ZNF613Q6PF04 617 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 STK35Q8TDR2 534 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 ADAMTS16Q8TE57 1224 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 SLC38A4Q969I6 547 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 CHST11Q9NPF2 352 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 NPDC1Q9NQX5 325 aaPredicted RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 CD300AQ9UGN4 299 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 FLNBO75369 2602 aaKnown RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 ARHGAP21Q5T5U3 1957 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 IGKV1D-42A0A075B6H8 117 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 LIPT2A6NK58 231 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 GPIP06744 558 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 AGTR1P30556 359 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 UQCRC1P31930 480 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 RPS5P46782 204 aaKnown RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 EGR4Q05215 589 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 RASGEF1BQ0VAM2 473 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 FOXD4Q12950 439 aaPredicted RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 KPNB1Q14974 876 aaKnown RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 SP5Q6BEB4 398 aaPredicted RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 FKBP9P1Q75LS8 142 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 CBLL1Q75N03 491 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 CCDC103Q8IW40 242 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 TUSC5Q8IXB3 177 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 SLC43A2Q8N370 569 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 KTI12Q96EK9 354 aaPredicted RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 HSH2DQ96JZ2 352 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 TAPBPLQ9BX59 468 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 OPN3Q9H1Y3 402 aaPredicted RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 PIGMQ9H3S5 423 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 GLRX2Q9NS18 164 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 KLHL13Q9P2N7 655 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 NKX1-2Q9UD57 310 aaPredicted RBP13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 SLC7A7Q9UM01 511 aa13.1□□□□□ -0.31
PCOLCE-201ENST00000223061 A0A087WUJ7 227 aa13.09□□□□□ -0.31
PCOLCE-201ENST00000223061 TRAPPC13A5PLN9 417 aa13.09□□□□□ -0.31
PCOLCE-201ENST00000223061 ZNF814B7Z6K7 855 aa13.09□□□□□ -0.31
PCOLCE-201ENST00000223061 DNPH1O43598 174 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms