RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 WNT16Q9UBV4 365 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 CDC123O75794 336 aaPredicted RBP20.36■□□□□ 0.85
CCDC9-201ENST00000221922 PEPDP12955 493 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 EVI2BP34910 448 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 GPR3P46089 330 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 HSD17B7P56937 341 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 MAT1AQ00266 395 aaKnown RBP20.36■□□□□ 0.85
CCDC9-201ENST00000221922 DBPQ10586 325 aaPredicted RBP20.36■□□□□ 0.85
CCDC9-201ENST00000221922 DMKNQ6E0U4 476 aaPredicted RBP20.36■□□□□ 0.85
CCDC9-201ENST00000221922 LAMTOR1Q6IAA8 161 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 LINC00114Q6XXX2 140 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 GPR135Q8IZ08 494 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 C17orf47Q8NEP4 570 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 C1orf216Q8TAB5 229 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 DEDD2Q8WXF8 326 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 C4orf36Q96KX1 117 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 LRFN5Q96NI6 719 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 EFCAB7A8K855 629 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 HRKO00198 91 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 PPP1R3DO95685 299 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 BTCP35070 178 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 GPR143P51810 404 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 SLC3A1Q07837 685 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 FUT7Q11130 342 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 TCTE1Q5JU00 501 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 PYHIN1Q6K0P9 492 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 ASB18Q6ZVZ8 466 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 SMPDL3BQ92485 455 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 HLA-CQ95604 372 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 SPACA7Q96KW9 195 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 HSPA12BQ96MM6 686 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 ABHD1Q96SE0 405 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 ABCG5Q9H222 651 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 EPHA6Q9UF33 1036 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 DTX4Q9Y2E6 619 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 CACNG2Q9Y698 323 aa20.36■□□□□ 0.85
CCDC9-201ENST00000221922 J3QLW9 94 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 MRPL3P09001 348 aaKnown RBP20.35■□□□□ 0.85
CCDC9-201ENST00000221922 ZNF19P17023 458 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 SLC16A1P53985 500 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 EPHA4P54764 986 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 NRG3P56975 720 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 ACTC1P68032 377 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 ACTA1P68133 377 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 CRYZQ08257 329 aaKnown RBP20.35■□□□□ 0.85
CCDC9-201ENST00000221922 POU4F2Q12837 409 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 BIKQ13323 160 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 CLPPQ16740 277 aaPredicted RBP20.35■□□□□ 0.85
CCDC9-201ENST00000221922 DEFB133Q30KQ1 61 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 C14orf28Q4W4Y0 310 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 PTCRAQ6ISU1 281 aaPredicted RBP20.35■□□□□ 0.85
CCDC9-201ENST00000221922 CREB3L2Q70SY1 520 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 TNFRSF13CQ96RJ3 184 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 MKKSQ9NPJ1 570 aaPredicted RBP20.35■□□□□ 0.85
CCDC9-201ENST00000221922 OR10H1Q9Y4A9 318 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 CLDN16Q9Y5I7 305 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 NPFFR2Q9Y5X5 522 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 SPTBP11277 2137 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 TRIOO75962 3097 aa20.35■□□□□ 0.85
CCDC9-201ENST00000221922 DNAH14Q0VDD8 3507 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 SYNDIG1LA6NDD5 238 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 ERVH48-1M5A8F1 160 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 ADAM11O75078 769 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 OR2B3O76000 313 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 CLUP10909 449 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 GALNSP34059 522 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 FNTBP49356 437 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 GFERP55789 205 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 OR12D2P58182 307 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 SERTAD2Q14140 314 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 CRMP1Q14194 572 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 BTBD16Q32M84 506 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 CADM2Q8N3J6 435 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 SPEM1Q8N4L4 309 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 MS4A15Q8N5U1 240 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 OR7G1Q8NGA0 311 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 TRMT10AQ8TBZ6 339 aaKnown RBP20.34■□□□□ 0.85
CCDC9-201ENST00000221922 ARSGQ96EG1 525 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 MMABQ96EY8 250 aaPredicted RBP20.34■□□□□ 0.85
CCDC9-201ENST00000221922 TGM7Q96PF1 710 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 OR10A5Q9H207 317 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 MCCC2Q9HCC0 563 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 PDE7BQ9NP56 450 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 SOHLH2Q9NX45 425 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 ERVK-19Q9WJR5 959 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 GON4LQ3T8J9 2241 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 CEP192Q8TEP8 1941 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 A0A0A6YYJ9 748 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 FITM1A5D6W6 292 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 FZD7O75084 574 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 NGFRP08138 427 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 CT45A8P0DMV1 189 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 CT45A9P0DMV2 189 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 BTG2P78543 158 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 MRPL28Q13084 256 aaKnown RBP20.34■□□□□ 0.85
CCDC9-201ENST00000221922 ERV3-1Q14264 604 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 ACSM3Q53FZ2 586 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 CT45A2Q5DJT8 189 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 FCRLBQ6BAA4 426 aa20.34■□□□□ 0.85
CCDC9-201ENST00000221922 GHDCQ8N2G8 530 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms