RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 OR14A2Q96R54 314 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 HEXA-AS1Q9H8Q6 139 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.23□□□□□ -0.45
SRP54-201ENST00000216774 SCP2D1Q9UJQ7 156 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 GNG8Q9UK08 70 aa12.23□□□□□ -0.45
SRP54-201ENST00000216774 C2orf74A8MZ97 194 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 ZNF593O00488 134 aaPredicted RBP12.22□□□□□ -0.45
SRP54-201ENST00000216774 PDCD5O14737 125 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 TNFRSF10CO14798 259 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 WNT1P04628 370 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 EDNRAP25101 427 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 GDI1P31150 447 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 UQCRC1P31930 480 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 GDNFP39905 211 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 GPR143P51810 404 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 AP2S1P53680 142 aaPredicted RBP12.22□□□□□ -0.45
SRP54-201ENST00000216774 ILF3Q12906 894 aaKnown RBP eCLIP12.22□□□□□ -0.458e-7■■■□□ 18.6
SRP54-201ENST00000216774 ISXQ2M1V0 245 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 RNASE12Q5GAN4 147 aaKnown RBP12.22□□□□□ -0.45
SRP54-201ENST00000216774 TMEM196Q5HYL7 178 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 SIGIRRQ6IA17 410 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 DPY19L2P2Q6ZN68 376 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 EID2Q8N6I1 236 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 BMPERQ8N8U9 685 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 ZNF527Q8NB42 609 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 TSACCQ96A04 125 aaPredicted RBP12.22□□□□□ -0.45
SRP54-201ENST00000216774 KXD1Q9BQD3 176 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 MKKSQ9NPJ1 570 aaPredicted RBP12.22□□□□□ -0.45
SRP54-201ENST00000216774 NCDNQ9UBB6 729 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 SCML1Q9UN30 329 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 TMA7Q9Y2S6 64 aaKnown RBP12.22□□□□□ -0.45
SRP54-201ENST00000216774 AK6Q9Y3D8 172 aaKnown RBP12.22□□□□□ -0.45
SRP54-201ENST00000216774 IER3IP1Q9Y5U9 82 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 NPTNQ9Y639 398 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 PRAF2O60831 178 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 PEX14O75381 377 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 ECDO95905 644 aaPredicted RBP12.22□□□□□ -0.45
SRP54-201ENST00000216774 SRMP19623 302 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 NAA10P41227 235 aaPredicted RBP12.22□□□□□ -0.45
SRP54-201ENST00000216774 RAB38P57729 211 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 SRP54P61011 504 aaKnown RBP12.22□□□□□ -0.45
SRP54-201ENST00000216774 PSG6Q00889 435 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 CAMK2DQ13557 499 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 ZNF141Q15928 474 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 ESPNLQ6ZVH7 1005 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 CSNK1A1LQ8N752 337 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 RPS4Y2Q8TD47 263 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 SGTBQ96EQ0 304 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 SORCS2Q96PQ0 1159 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 TTTY10Q9BZA0 68 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 C20orf85Q9H1P6 137 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 RPS6KB2Q9UBS0 482 aa12.22□□□□□ -0.45
SRP54-201ENST00000216774 NAP1L6A6NFF2 107 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 MCIDASD6RGH6 385 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 AIPO00170 330 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 ARPC3O15145 178 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 MAGEB4O15481 346 aaPredicted RBP12.21□□□□□ -0.45
SRP54-201ENST00000216774 SSNA1O43805 119 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 OR10H2O60403 315 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 PPM1BO75688 479 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 RASGRP1O95267 797 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 POU3F3P20264 500 aaPredicted RBP12.21□□□□□ -0.45
SRP54-201ENST00000216774 AP3S2P59780 193 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 FGFBP1Q14512 234 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 KIRREL2Q6UWL6 708 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 CMTM4Q8IZR5 234 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 SHISA5Q8N114 240 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 SUN5Q8TC36 379 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 MRI1Q9BV20 369 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 LMAN2LQ9H0V9 348 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 DLL4Q9NR61 685 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 EVA1BQ9NVM1 165 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 DZANK1Q9NVP4 752 aa12.21□□□□□ -0.45
SRP54-201ENST00000216774 FAM221BA6H8Z2 402 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 IFITM5A6NNB3 132 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 H0Y8X5 98 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 KHNYNO15037 678 aaKnown RBP12.21□□□□□ -0.46
SRP54-201ENST00000216774 SHOXO15266 292 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 ICMTO60725 284 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 TGM6O95932 706 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 IGKV1D-16P01601 117 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 S1PR1P21453 382 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 CCR9P51686 369 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 IL10RAQ13651 578 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 ELFN2Q5R3F8 820 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 FAM199XQ6PEV8 388 aaPredicted RBP12.21□□□□□ -0.46
SRP54-201ENST00000216774 PRSS45Q7RTY3 260 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 NPEPL1Q8NDH3 523 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 OR51L1Q8NGJ5 315 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 ELSPBP1Q96BH3 223 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 PDCD1LG2Q9BQ51 273 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 NMNAT2Q9BZQ4 307 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 AUNIPQ9H7T9 357 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 NOX4Q9NPH5 578 aa12.21□□□□□ -0.46
SRP54-201ENST00000216774 A0A0J9YY10 115 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 A0A1W2PQF6 199 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 EFCAB7A8K855 629 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.2□□□□□ -0.46
SRP54-201ENST00000216774 NPIPB9F8W1W9 429 aa12.2□□□□□ -0.46
SRP54-201ENST00000216774 GABARAPH6UMI1 98 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms