RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 SLC22A11Q9NSA0 550 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 NENFQ9UMX5 172 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 OTOL1A6NHN0 477 aaPredicted RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 SYT7O43581 403 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 GPX5O75715 221 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 PMS2P2O95744 297 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 IL33O95760 270 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 SERPINA2P20848 420 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 IMPA1P29218 277 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 SNU13P55769 128 aaKnown RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 CTXN1P60606 82 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 RPL23AP62750 156 aaKnown RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 CST9LP1Q5W188 147 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 KDM4DQ6B0I6 523 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 FAM58AQ8N1B3 248 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 ZNF808Q8N4W9 903 aaPredicted RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 OR52I1Q8NGK6 324 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 OR6F1Q8NGZ6 308 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 ABHD4Q8TB40 342 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 C1QTNF2Q9BXJ5 285 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 MTHFD2LQ9H903 347 aaPredicted RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 C5AR2Q9P296 337 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 IER3IP1Q9Y5U9 82 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 MN1Q10571 1320 aaPredicted RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 A0A1W2PP55 124 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 DCTN6O00399 190 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 GFRA2O00451 464 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 HBE1P02100 147 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 SERPINA5P05154 406 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 CX3CR1P49238 355 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 EMP3P54852 163 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 BCDIN3DQ7Z5W3 292 aaKnown RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 TRAPPC6BQ86SZ2 158 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 PELI3Q8N2H9 469 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 PTCHD1Q96NR3 888 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 RNF186Q9NXI6 227 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 MDFIC2A0A1B0GVS7 189 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 HEPACAM2A8MVW5 462 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 UMAD1C9J7I0 102 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 SOCS7O14512 581 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 YY2O15391 372 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 BRINP1O60477 761 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 ATP1B1P05026 303 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 HNRNPKP61978 463 aaKnown RBP eCLIP9.76□□□□□ -0.85
VCL-201ENST00000211998 TLE4Q04727 773 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 GBX1Q14549 363 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 NXPE4Q6UWF7 544 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 LRRC25Q8N386 305 aaPredicted RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 ARFGAP1Q8N6T3 406 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 CD200R1Q8TD46 325 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 DOK4Q8TEW6 326 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 DVL3Q92997 716 aaPredicted RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 SCAMP4Q969E2 229 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 TEPSINQ96N21 525 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 PAPOLGQ9BWT3 736 aaKnown RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 HCAR1Q9BXC0 346 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 PARP12Q9H0J9 701 aaKnown RBP9.76□□□□□ -0.85
VCL-201ENST00000211998 GCM1Q9NP62 436 aa9.76□□□□□ -0.85
VCL-201ENST00000211998 OR6C76A6NM76 312 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 GABRR3A8MPY1 467 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 C5AR1P21730 350 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 CCNOP22674 350 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 MRPL19P49406 292 aaKnown RBP9.75□□□□□ -0.85
VCL-201ENST00000211998 STK19P49842 368 aaPredicted RBP9.75□□□□□ -0.85
VCL-201ENST00000211998 SGCAQ16586 387 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 RNF111Q6ZNA4 994 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 DBX2Q6ZNG2 339 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 DUS3LQ96G46 650 aaKnown RBP9.75□□□□□ -0.85
VCL-201ENST00000211998 TAF9BQ9HBM6 251 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 A0A1W2PQU0 124 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 C20orf202A1L168 122 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 ACOD1A6NK06 481 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 OR2T1O43869 369 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 SQSTM1Q13501 440 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 ADIRFQ15847 76 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 ZMAT1Q5H9K5 638 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 FAM74A1Q5RGS3 127 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 STEAP1BQ6NZ63 245 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 CLEC14AQ86T13 490 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 FUNDC1Q8IVP5 155 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 HAVCR2Q8TDQ0 301 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 RBMXL1Q96E39 390 aaKnown RBP9.75□□□□□ -0.85
VCL-201ENST00000211998 NIPSNAP1Q9BPW8 284 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 DEFB126Q9BYW3 111 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 OR52D1Q9H346 318 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 NRIP3Q9NQ35 241 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 NPIPA2E9PIF3 369 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 NPIPA3F8WFD2 350 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 OR2F2O95006 317 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 TMEM225BP0DP42 221 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 SOX4Q06945 474 aaPredicted RBP9.75□□□□□ -0.85
VCL-201ENST00000211998 PLCXD2Q0VAA5 305 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 OR2F1Q13607 317 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 MANEALQ5VSG8 457 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 RPL22L1Q6P5R6 122 aaKnown RBP9.75□□□□□ -0.85
VCL-201ENST00000211998 COX15Q7KZN9 410 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 NDUFAF7Q7L592 441 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 OR5L2Q8NGL0 311 aa9.75□□□□□ -0.85
VCL-201ENST00000211998 ZNF296Q8WUU4 475 aaPredicted RBP9.75□□□□□ -0.85
VCL-201ENST00000211998 TMEM239Q8WW34 195 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms