RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 IL6P05231 212 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 ZCCHC18P0CG32 403 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 UQCRBP14927 111 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 TACR3P29371 465 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 ACAA2P42765 397 aaKnown RBP13.94□□□□□ -0.18
ERCC1-201ENST00000013807 FOXG1P55316 489 aaPredicted RBP13.94□□□□□ -0.18
ERCC1-201ENST00000013807 OR2B6P58173 313 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 FAPQ12884 760 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 ZSWIM7Q19AV6 140 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 ZNF544Q6NX49 715 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 WDR31Q8NA23 367 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 SPATA3Q8NHX4 192 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 WDR60Q8WVS4 1066 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 INPP5KQ9BT40 448 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 THAP1Q9NVV9 213 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 GDF2Q9UK05 429 aaPredicted RBP13.94□□□□□ -0.18
ERCC1-201ENST00000013807 ZC3H12DA2A288 527 aaKnown RBP13.93□□□□□ -0.18
ERCC1-201ENST00000013807 ELOA3DA6NLF2 546 aaPredicted RBP13.93□□□□□ -0.18
ERCC1-201ENST00000013807 CCT8L1PA6NM43 557 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 TRPC5OSA6NMA1 111 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 SLCO1B7G3V0H7 640 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 H7C417 338 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 KRT75O95678 551 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 WDR4P57081 412 aaKnown RBP13.93□□□□□ -0.18
ERCC1-201ENST00000013807 DSCR9P59020 149 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 IRX1P78414 480 aaPredicted RBP13.93□□□□□ -0.18
ERCC1-201ENST00000013807 TGFBR3Q03167 851 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 ELOA3BQ3SY89 546 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 COX20Q5RI15 118 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 CEP85LQ5SZL2 805 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 MRPL2Q5T653 305 aaKnown RBP13.93□□□□□ -0.18
ERCC1-201ENST00000013807 ZNF621Q6ZSS3 439 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 HIPK1Q86Z02 1210 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 ZIC4Q8N9L1 334 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 MAPK1IP1LQ8NDC0 245 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 ELOA3Q8NG57 546 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 OR52N5Q8NH56 324 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 ADAD1Q96M93 576 aaKnown RBP13.93□□□□□ -0.18
ERCC1-201ENST00000013807 HS6ST2Q96MM7 605 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 KCNK9Q9NPC2 374 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 SLC7A10Q9NS82 523 aa13.93□□□□□ -0.18
ERCC1-201ENST00000013807 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■■□□□ 14.1
ERCC1-201ENST00000013807 LIPT2A6NK58 231 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 TFPTP0C1Z6 253 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 NR2F1P10589 423 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 IDO1P14902 403 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 PAX7P23759 505 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 EPHA3P29320 983 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 MPGP29372 298 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 P2RY4P51582 365 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
ERCC1-201ENST00000013807 TSPO2Q5TGU0 170 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 RNF220Q5VTB9 566 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 HMGN2P46Q86SG4 172 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 PEX5LQ8IYB4 626 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 DEPDC4Q8N2C3 294 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 PIAS4Q8N2W9 510 aaPredicted RBP13.92□□□□□ -0.18
ERCC1-201ENST00000013807 MUC15Q8N387 334 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 OR52E4Q8NGH9 312 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 RHNO1Q9BSD3 238 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 SLC17A5Q9NRA2 495 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 SLC6A13Q9NSD5 602 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 CALML5Q9NZT1 146 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 AMDHD2Q9Y303 409 aa13.92□□□□□ -0.18
ERCC1-201ENST00000013807 AQP7P3A6NL99 342 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 RFXANKO14593 260 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 NPIPB7O75200 414 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 SLC22A3O75751 556 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 VAMP5O95183 116 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 TP53P04637 393 aaPredicted RBP13.91□□□□□ -0.18
ERCC1-201ENST00000013807 GSNP06396 782 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 GPIP06744 558 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 CCNA2P20248 432 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 ZNF83P51522 516 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 NME5P56597 212 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 WBP2NLQ6ICG8 309 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 SLC22A25Q6T423 547 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 CASP12Q6UXS9 341 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 B3GLCTQ6Y288 498 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 MSANTD1Q6ZTZ1 278 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 CXXC5Q7LFL8 322 aaKnown RBP13.91□□□□□ -0.18
ERCC1-201ENST00000013807 FBXL14Q8N1E6 418 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 TMEM99Q8N816 258 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 POMGNT2Q8NAT1 580 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 SLC38A5Q8WUX1 472 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 SLC35B4Q969S0 331 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 DNAJA3Q96EY1 480 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 ZBTB18Q99592 522 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 CACNG6Q9BXT2 260 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 WDR55Q9H6Y2 383 aaPredicted RBP13.91□□□□□ -0.18
ERCC1-201ENST00000013807 OBP2BQ9NPH6 170 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 SDR39U1Q9NRG7 319 aaPredicted RBP13.91□□□□□ -0.18
ERCC1-201ENST00000013807 RLIMQ9NVW2 624 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 THUMPD1Q9NXG2 353 aaKnown RBP13.91□□□□□ -0.18
ERCC1-201ENST00000013807 P2RX2Q9UBL9 471 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 UPB1Q9UBR1 384 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.91□□□□□ -0.18
ERCC1-201ENST00000013807 CHST2Q9Y4C5 530 aa13.91□□□□□ -0.18
ERCC1-201ENST00000013807 V9GYY5 206 aaPredicted RBP13.91□□□□□ -0.18
ERCC1-201ENST00000013807 CUBNO60494 3623 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms