RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 OR1Q1Q15612 314 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 SNAPC1Q16533 368 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 TIMM50Q3ZCQ8 353 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 KLHL22Q53GT1 634 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 FIGNL1Q6PIW4 674 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 HSDL2Q6YN16 418 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF620Q6ZNG0 422 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 SLC29A4Q7RTT9 530 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 NRMQ8IXM6 262 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 GPALPP1Q8IXQ4 340 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 CMIPQ8IY22 773 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 CYP4Z2PQ8N1L4 340 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 NANOGP1Q8N7R0 232 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 PROKR2Q8NFJ6 384 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 BRIX1Q8TDN6 353 aaKnown RBP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 DOK4Q8TEW6 326 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF721Q8TF20 911 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 PSMF1Q92530 271 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 SENP5Q96HI0 755 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 SH3YL1Q96HL8 342 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 FAM46AQ96IP4 442 aaKnown RBP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 LRR1Q96L50 414 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 HS6ST2Q96MM7 605 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 MGLLQ99685 303 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 TAPBPLQ9BX59 468 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 TEX12Q9BXU0 123 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 OR8D2Q9GZM6 311 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 SLIRPQ9GZT3 109 aaKnown RBP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 EGLN3Q9H6Z9 239 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 TBC1D23Q9NUY8 699 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 PRODH2Q9UF12 536 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 SLC7A7Q9UM01 511 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 ERGIC3Q9Y282 383 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 B3GNT3Q9Y2A9 372 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 TMEM5Q9Y2B1 443 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 NTNG1Q9Y2I2 539 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 RP1L1Q8IWN7 2480 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 TRBV11-1A0A0K0K1C0 115 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 A0A1B0GVG6 124 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 CLDN25C9JDP6 229 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 CCRL2O00421 344 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 NADKO95544 446 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-224ENST00000641711 SCG5P05408 212 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 PRG2P13727 222 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 GADD45AP24522 165 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 CLK1P49759 484 aaKnown RBP9.37□□□□□ -0.91
PHGDH-224ENST00000641711 CTBP2P56545 445 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 SLC37A1P57057 533 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 PLAURQ03405 335 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 PRKCDQ05655 676 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 RAB40BQ12829 278 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF267Q14586 743 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-224ENST00000641711 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.37□□□□□ -0.91
PHGDH-224ENST00000641711 PGGHGQ32M88 737 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 FLYWCH1Q4VC44 716 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 ABHD17BQ5VST6 288 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 RPL13AP3Q6NVV1 102 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 NPSR1Q6W5P4 371 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 GDPGP1Q6ZNW5 385 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 TMPRSS11FQ6ZWK6 438 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 USP43Q70EL4 1123 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 ZAR1Q86SH2 424 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 ATCAYQ86WG3 371 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 SLC43A2Q8N370 569 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 SLC15A4Q8N697 577 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF615Q8N8J6 731 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 FDCSPQ8NFU4 85 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 KBTBD8Q8NFY9 601 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 OR6Q1Q8NGQ2 317 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 OR4Q3Q8NH05 313 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 TMEM255BQ8WV15 326 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 TMEM239Q8WW34 195 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 S100ZQ8WXG8 99 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 RPL3LQ92901 407 aaKnown RBP9.37□□□□□ -0.91
PHGDH-224ENST00000641711 TP53INP1Q96A56 240 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 ZHX1-C8orf76Q96EF9 292 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 OR5M11Q96RB7 305 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 MESP1Q9BRJ9 268 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 G6PC3Q9BUM1 346 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 CNPPD1Q9BV87 410 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 NUDT9Q9BW91 350 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 MND1Q9BWT6 205 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 TRIM2Q9C040 744 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 WDR12Q9GZL7 423 aaKnown RBP9.37□□□□□ -0.91
PHGDH-224ENST00000641711 SLC25A18Q9H1K4 315 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 DCSTAMPQ9H295 470 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 DSN1Q9H410 356 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 OCEL1Q9H607 264 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 SIAEQ9HAT2 523 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 TMEM27Q9HBJ8 222 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 AKIP1Q9NQ31 210 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 CNIH4Q9P003 139 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 ERVK-19Q9WJR5 959 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 YARS2Q9Y2Z4 477 aaKnown RBP9.37□□□□□ -0.91
PHGDH-224ENST00000641711 PMF1-BGLAPU3KQ54 211 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 LOC400499M0QZD8 3231 aa9.37□□□□□ -0.91
PHGDH-224ENST00000641711 NPIPA5A0A0B4J1W7 369 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 A0A0B4J2E0 115 aa9.36□□□□□ -0.91
PHGDH-224ENST00000641711 A0A1B0GX12 115 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms