RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 C3orf49Q96BT1 292 aa11.13□□□□□ -0.63
CLN8-212ENST00000637083 UBL7Q96S82 380 aaPredicted RBP11.13□□□□□ -0.63
CLN8-212ENST00000637083 TIMP4Q99727 224 aa11.13□□□□□ -0.63
CLN8-212ENST00000637083 TMEM43Q9BTV4 400 aa11.13□□□□□ -0.63
CLN8-212ENST00000637083 YIPF2Q9BWQ6 316 aa11.13□□□□□ -0.63
CLN8-212ENST00000637083 RNF32Q9H0A6 362 aa11.13□□□□□ -0.63
CLN8-212ENST00000637083 PPP1R3EQ9H7J1 279 aa11.13□□□□□ -0.63
CLN8-212ENST00000637083 ENAMQ9NRM1 1142 aa11.13□□□□□ -0.63
CLN8-212ENST00000637083 CUTCQ9NTM9 273 aa11.13□□□□□ -0.63
CLN8-212ENST00000637083 IGHV5-51A0A0C4DH38 117 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 ADAM11O75078 769 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 ARL6IP5O75915 188 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 UBL4AP11441 157 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 HIST1H1CP16403 213 aaKnown RBP11.12□□□□□ -0.63
CLN8-212ENST00000637083 FHL1Q13642 323 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 QPRTQ15274 297 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 CARTPTQ16568 116 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 IDNKQ5T6J7 187 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 DMKNQ6E0U4 476 aaPredicted RBP11.12□□□□□ -0.63
CLN8-212ENST00000637083 SPATC1Q76KD6 591 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 CEACAM19Q7Z692 300 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 RDH10Q8IZV5 341 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 DEFB119Q8N690 84 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 FAM71CQ8NEG0 241 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 OR4C3Q8NH37 302 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 OR4K13Q8NH42 304 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 LIPHQ8WWY8 451 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 PHYHIPQ92561 330 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 TP53INP1Q96A56 240 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 ZC3HAV1LQ96H79 300 aaKnown RBP11.12□□□□□ -0.63
CLN8-212ENST00000637083 SENP5Q96HI0 755 aaPredicted RBP11.12□□□□□ -0.63
CLN8-212ENST00000637083 DCLRE1CQ96SD1 692 aaKnown RBP11.12□□□□□ -0.63
CLN8-212ENST00000637083 GPX7Q96SL4 187 aaPredicted RBP11.12□□□□□ -0.63
CLN8-212ENST00000637083 SPRTNQ9H040 489 aaPredicted RBP11.12□□□□□ -0.63
CLN8-212ENST00000637083 C12orf10Q9HB07 376 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 NRIP3Q9NQ35 241 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 NPFFR2Q9Y5X5 522 aa11.12□□□□□ -0.63
CLN8-212ENST00000637083 OR2B3O76000 313 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 APEHP13798 732 aaKnown RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 APEX1P27695 318 aaKnown RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 SLC6A8P48029 635 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 DIO1P49895 249 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 GFERP55789 205 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 NXPH1P58417 271 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 SLC3A1Q07837 685 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 SF3A2Q15428 464 aaKnown RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 NNATQ16517 81 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 CCDC58Q4VC31 144 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 RPL22L1Q6P5R6 122 aaKnown RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 NCCRP1Q6ZVX7 275 aaPredicted RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 NUP54Q7Z3B4 507 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 PLXDC1Q8IUK5 500 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 TMEM151BQ8IW70 566 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 SLC35F2Q8IXU6 374 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 SCAIQ8N9R8 606 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 SDR9C7Q8NEX9 313 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 HAVCR2Q8TDQ0 301 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 SNX33Q8WV41 574 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 LCORQ96JN0 433 aaPredicted RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 FRMD6Q96NE9 622 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 PHOX2BQ99453 314 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLN8-212ENST00000637083 C11orf54Q9H0W9 315 aaPredicted RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 PNO1Q9NRX1 252 aaKnown RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 SIRT4Q9Y6E7 314 aaPredicted RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 CLCA3PQ9Y6N3 262 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 TRAV1-2A0A0B4J238 106 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 LINC00854A0A1B0GVQ3 168 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 SHISA3A0PJX4 238 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 MEIOCA2RUB1 952 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 FRG2CA6NGY1 282 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 HMX3A6NHT5 357 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 MCIDASD6RGH6 385 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 IMPA2O14732 288 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 OGG1O15527 345 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 ZNF264O43296 627 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 GATBO75879 557 aaKnown RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 NCR1O76036 304 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 CLUP10909 449 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 IL9P15248 144 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 RBMS1P29558 406 aaKnown RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 PYCR1P32322 319 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 MAP2K3P46734 347 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 OR12D2P58182 307 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 HSD11B2P80365 405 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 RPL6Q02878 288 aaKnown RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 KCNJ8Q15842 424 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 DEFB133Q30KQ1 61 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 CDONQ4KMG0 1287 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 ACSM3Q53FZ2 586 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 PLET1Q6UQ28 207 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 TTLL10Q6ZVT0 673 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 PXKQ7Z7A4 578 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 GPR135Q8IZ08 494 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 METTL27Q8N6F8 245 aaPredicted RBP11.11□□□□□ -0.63
CLN8-212ENST00000637083 OR14A16Q8NHC5 309 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 PHOSPHO1Q8TCT1 267 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 SHDQ96IW2 340 aa11.11□□□□□ -0.63
CLN8-212ENST00000637083 NEDD4LQ96PU5 975 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms