RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 NDUFA2O43678 99 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 LPLP06858 475 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 GABRA1P14867 456 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 PRKACAP17612 351 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 SRMP19623 302 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 CCR2P41597 374 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 KIAA1024LP59773 190 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 GK2Q14410 553 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 LHX8Q68G74 356 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 OR5M10Q6IEU7 315 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 CNOT9Q92600 299 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 PNPLA2Q96AD5 504 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 ARMC5Q96C12 935 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 PEX11GQ96HA9 241 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 DERL3Q96Q80 235 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 IFT46Q9NQC8 304 aa13.67□□□□□ -0.22
CACNA1A-220ENST00000635988 PTP4A3O75365 173 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 LYPD3O95274 346 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 FGF19O95750 216 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 CLUP10909 449 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 MAPK3P27361 379 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 DPP4P27487 766 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 HTR2AP28223 471 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 SLC6A6P31641 620 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 MNDAP41218 407 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 TM4SF4P48230 202 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 GMFBP60983 142 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 LTB4RQ15722 352 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 ALKAL2Q6UX46 152 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 ZNF619Q8N2I2 560 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 CYB561A3Q8NBI2 242 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 SNX33Q8WV41 574 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 FBXW5Q969U6 566 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 SLC25A38Q96DW6 304 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 CNN2Q99439 309 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 SDF2Q99470 211 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 AQP8O94778 261 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 STATHP02808 62 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 ADRB1P08588 477 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 EDNRAP25101 427 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 FAUP35544 74 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 STX4Q12846 297 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 EIF2B5Q13144 721 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 GPR68Q15743 365 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 LINC00303Q3SY05 128 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 LILRA6Q6PI73 481 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 FAM111BQ6SJ93 734 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 DEFB128Q7Z7B8 93 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 LRRC25Q8N386 305 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 OR7G2Q8NG99 324 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 OR2L8Q8NGY9 312 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 C1orf216Q8TAB5 229 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 NSMAFQ92636 917 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 SMAD5Q99717 465 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 MACROD1Q9BQ69 325 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 C14orf105Q9NVL8 296 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 KLK11Q9UBX7 282 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 FBXL21Q9UKT6 434 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 HRH3Q9Y5N1 445 aa13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 TCF20Q9UGU0 1960 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-220ENST00000635988 CCL16O15467 120 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 PPP1R3DO95685 299 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 CALCBP10092 127 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 NID1P14543 1247 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 ANXA7P20073 488 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 PTH2RP49190 550 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 IL10RAQ13651 578 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 ZNF77Q15935 545 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 TMEM69Q5SWH9 247 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 SFRP5Q5T4F7 317 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 HES5Q5TA89 166 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 FCRLBQ6BAA4 426 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 GSG1LQ6UXU4 331 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 KREMEN2Q8NCW0 462 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 C7orf57Q8NEG2 295 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 DNAAF1Q8NEP3 725 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 ASB13Q8WXK3 278 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 ZNF350Q9GZX5 532 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 ARL6Q9H0F7 186 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 WNT6Q9Y6F9 365 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 LRRK1Q38SD2 2015 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 D6RAR5 112 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 ARPC5O15511 151 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 RNGTTO60942 597 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 POU3F2P20265 443 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 RPS4Y1P22090 263 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 MAZP56270 477 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 LGALS3BPQ08380 585 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 GGTLC2Q14390 218 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 TEAD2Q15562 447 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 ZNF613Q6PF04 617 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 MTSS1LQ765P7 747 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 FCRLAQ7L513 359 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 OR51A7Q8NH64 312 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 SMAP2Q8WU79 429 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 MYO10Q9HD67 2058 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 NOX4Q9NPH5 578 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 PRSS16Q9NQE7 514 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 TM7SF3Q9NS93 570 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms