RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 RPL3P39023 403 aaKnown RBP9.64□□□□□ -0.87
DDX41-218ENST00000625286 NR4A2P43354 598 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 CLDN8P56748 225 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 OR2B6P58173 313 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 LGALS3BPQ08380 585 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 GGTLC2Q14390 218 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 ATP6AP1LQ52LC2 224 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 OR7E24Q6IFN5 339 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 TNFAIP8L2Q6P589 184 aaPredicted RBP9.64□□□□□ -0.87
DDX41-218ENST00000625286 ANKS4BQ8N8V4 417 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 SLC25A43Q8WUT9 341 aaPredicted RBP9.64□□□□□ -0.87
DDX41-218ENST00000625286 XAGE5Q8WWM1 108 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 TMEM234Q8WY98 164 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 C1orf159Q96HA4 380 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 CHODLQ9H9P2 273 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 EML4Q9HC35 981 aaKnown RBP9.64□□□□□ -0.87
DDX41-218ENST00000625286 ATAD3AQ9NVI7 634 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 LPAR3Q9UBY5 353 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 HDGFL3Q9Y3E1 203 aa9.64□□□□□ -0.87
DDX41-218ENST00000625286 TMED7-TICAM2A0A0A6YYA0 188 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 IGHV1-18A0A0C4DH31 117 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 RNF103-CHMP3A0A140T963 221 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 LOC100289279A0A1B0GTE1 492 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 DUXAA6NLW8 204 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 GPR171O14626 319 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 SPAG7O75391 227 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 GUSBP08236 651 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 SRD5A1P18405 259 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 IDH2P48735 452 aaKnown RBP9.63□□□□□ -0.87
DDX41-218ENST00000625286 KCNJ10P78508 379 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 EMX2Q04743 252 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 HIKESHIQ53FT3 197 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 CASP12Q6UXS9 341 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 LINGO2Q7L985 606 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 GRINAQ7Z429 371 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 ANKRD46Q86W74 232 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 NATD1Q8N6N6 113 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 ZNF563Q8TA94 476 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 PIGXQ8TBF5 258 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 UBLCP1Q8WVY7 318 aaPredicted RBP9.63□□□□□ -0.87
DDX41-218ENST00000625286 ARL8AQ96BM9 186 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 ROPN1LQ96C74 230 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 FBXO17Q96EF6 278 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 SLC35G5Q96KT7 338 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 ZNF385AQ96PM9 386 aaKnown RBP9.63□□□□□ -0.87
DDX41-218ENST00000625286 PRPF18Q99633 342 aaKnown RBP9.63□□□□□ -0.87
DDX41-218ENST00000625286 SEC61A2Q9H9S3 476 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 MKS1Q9NXB0 559 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 TMEM181Q9P2C4 612 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 DCTN4Q9UJW0 460 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 OSGIN1Q9UJX0 560 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 TRAPPC4Q9Y296 219 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 TMED7Q9Y3B3 224 aa9.63□□□□□ -0.87
DDX41-218ENST00000625286 RNASET2O00584 256 aaKnown RBP9.62□□□□□ -0.87
DDX41-218ENST00000625286 ANKRD28O15084 1053 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 DNPH1O43598 174 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 ITM2AO43736 263 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 AK1P00568 194 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 IGFBP1P08833 259 aaPredicted RBP9.62□□□□□ -0.87
DDX41-218ENST00000625286 IL2RGP31785 369 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 MAGEA8P43361 318 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 CLK1P49759 484 aaKnown RBP9.62□□□□□ -0.87
DDX41-218ENST00000625286 GZMKP49863 264 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 P2RY4P51582 365 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 CHRNB3Q05901 458 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 MAPK11Q15759 364 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 SAXO2Q658L1 398 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 C16orf62Q7Z3J2 963 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 CNPY4Q8N129 248 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 DEPDC4Q8N2C3 294 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 TMEM99Q8N816 258 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 ANKFN1Q8N957 763 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 C1orf162Q8NEQ5 155 aaPredicted RBP9.62□□□□□ -0.87
DDX41-218ENST00000625286 OR4A15Q8NGL6 344 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 TCP10LQ8TDR4 215 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 C3orf49Q96BT1 292 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 TUBGCP3Q96CW5 907 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 BOD1Q96IK1 185 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 APOPT1Q96IL0 206 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 FKRPQ9H9S5 495 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 EXOSC3Q9NQT5 275 aaKnown RBP9.62□□□□□ -0.87
DDX41-218ENST00000625286 ASIC5Q9NY37 505 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 SLC35A3Q9Y2D2 325 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 WDR45Q9Y484 360 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 PMF1-BGLAPU3KQ54 211 aa9.62□□□□□ -0.87
DDX41-218ENST00000625286 TLDC2A0PJX2 215 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 LRP5LA4QPB2 252 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 HMGN4O00479 90 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 NR5A2O00482 541 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 CPSF4O95639 269 aaKnown RBP9.61□□□□□ -0.87
DDX41-218ENST00000625286 CHRM4P08173 479 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 CSF3P09919 207 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 CDH2P19022 906 aaPredicted RBP9.61□□□□□ -0.87
DDX41-218ENST00000625286 TACR3P29371 465 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 MPGP29372 298 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 CALCRP30988 508 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 PDLIM4P50479 330 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 TUBA1BP68363 451 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 TUBA4AP68366 448 aa9.61□□□□□ -0.87
DDX41-218ENST00000625286 ADIPOQQ15848 244 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms