RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ALDH6A1Q02252 535 aaKnown RBP16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 PRKCDQ05655 676 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 CRYZQ08257 329 aaKnown RBP16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 RAET1LQ5VY80 246 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 C1orf94Q6P1W5 598 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 GTPBP8Q8N3Z3 284 aaPredicted RBP16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 KDF1Q8NAX2 398 aaPredicted RBP16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 OR14L1PQ8NHC6 308 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 GNPDA2Q8TDQ7 276 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 DGCR6LQ9BY27 220 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 SLC19A3Q9BZV2 496 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 ZNF703Q9H7S9 590 aaPredicted RBP16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 CHRNA9Q9UGM1 479 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 MGAQ8IWI9 3026 aa16.12■□□□□ 0.17
PTCHD3-202ENST00000622555 ADH6P28332 368 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 YRDCQ86U90 279 aaKnown RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 CDK20Q8IZL9 346 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 ZFP62Q8NB50 900 aaPredicted RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 FAM98AQ8NCA5 519 aaKnown RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 FAM83FQ8NEG4 500 aaPredicted RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 ATP6V1C2Q8NEY4 427 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 BPIFA2Q96DR5 249 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 PAPOLBQ9NRJ5 636 aaKnown RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 SERINC1Q9NRX5 453 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 SMPD3Q9NY59 655 aaPredicted RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 TMEM5Q9Y2B1 443 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 POFUT2Q9Y2G5 429 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 ENO4A6NNW6 628 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 GLSO94925 669 aaPredicted RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 RAD23AP54725 363 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 CTBP2P56545 445 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 EGR4Q05215 589 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 ZNF169Q14929 603 aaPredicted RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 GLYR1Q49A26 553 aaPredicted RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 UBL7Q96S82 380 aaPredicted RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 GPA33Q99795 319 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 PIGQQ9BRB3 760 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 UCK2Q9BZX2 261 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 OR2B2Q9GZK3 357 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 ZNF696Q9H7X3 374 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 TP53TG5Q9Y2B4 290 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 MRPS18CQ9Y3D5 142 aaKnown RBP16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 PCDHGB5Q9Y5G0 923 aa16.11■□□□□ 0.17
PTCHD3-202ENST00000622555 LAMA5O15230 3695 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 ZC3H12DA2A288 527 aaKnown RBP16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 A8MVM7 634 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 ACOT7O00154 380 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 EFNA2O43921 213 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 SNAP29O95721 258 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 ZNF17P17021 662 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 MAKP20794 623 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 IL11P20809 199 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 MAGEA5P43359 124 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 PPIAP62937 165 aaKnown RBP16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 MYBPC1Q00872 1141 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 TMEM44Q2T9K0 475 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 RFX4Q33E94 735 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 ZIK1Q3SY52 487 aaPredicted RBP16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 KLHL17Q6TDP4 642 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 SLC22A16Q86VW1 577 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 TMEM251Q8N6I4 163 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 TFAP2CQ92754 450 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 RELTQ969Z4 430 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 SGTBQ96EQ0 304 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 CRELD1Q96HD1 420 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 ARHGAP9Q9BRR9 750 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 MFRPQ9BY79 579 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 OR11A1Q9GZK7 315 aa16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 SPIN1Q9Y657 262 aaPredicted RBP16.1■□□□□ 0.17
PTCHD3-202ENST00000622555 OR2M5A3KFT3 312 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 ZNF208O43345 1280 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 SMIM18P0DKX4 95 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 PEPDP12955 493 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 CDH2P19022 906 aaPredicted RBP16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 FPR3P25089 353 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 GSSP48637 474 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 PMP22Q01453 160 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 TSPAN31Q12999 210 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 SELENBP1Q13228 472 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 HYAL4Q2M3T9 481 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 WIPI1Q5MNZ9 446 aaPredicted RBP16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 C3orf33Q6P1S2 294 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 Q6ZS92 163 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 ASB18Q6ZVZ8 466 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 C10orf53Q8N6V4 93 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 RBMXL3Q8N7X1 1067 aaKnown RBP16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 STK35Q8TDR2 534 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 DDIT4LQ96D03 193 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 KTI12Q96EK9 354 aaPredicted RBP16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 ANKRD60Q9BZ19 345 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 TOR3AQ9H497 397 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 RIBC2Q9H4K1 309 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 TMEM185BQ9H7F4 350 aa16.09■□□□□ 0.17
PTCHD3-202ENST00000622555 TRAV36DV7A0A075B6V5 113 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 EFCAB9A8MZ26 197 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 H3BML4 177 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 KLF4O43474 513 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 CH25HO95992 272 aa16.08■□□□□ 0.17
PTCHD3-202ENST00000622555 HPNP05981 417 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 407.1 ms