RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 TBPL1P62380 186 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 DMPKQ09013 629 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 LRRC74AQ0VAA2 488 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 DDX39BQ13838 428 aaKnown RBP4.3□□□□□ -1.72
VPS29-212ENST00000621131 GRB7Q14451 532 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 NFE2L1Q14494 772 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 ABRAXAS2Q15018 415 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 P2RY6Q15077 328 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 CTU2Q2VPK5 515 aaKnown RBP4.3□□□□□ -1.72
VPS29-212ENST00000621131 C18orf21Q32NC0 220 aaPredicted RBP4.3□□□□□ -1.72
VPS29-212ENST00000621131 UGT3A2Q3SY77 523 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 SPIN4Q56A73 249 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 SAMD4BQ5PRF9 694 aaKnown RBP4.3□□□□□ -1.72
VPS29-212ENST00000621131 C6orf136Q5SQH8 315 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 IL23RQ5VWK5 629 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 MED27Q6P2C8 311 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 ZFP1Q6P2D0 407 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 ZNF613Q6PF04 617 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 SCIMPQ6UWF3 145 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 MBOAT1Q6ZNC8 495 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 SLC16A9Q7RTY1 509 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 TMPRSS11BQ86T26 416 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 C17orf64Q86WR6 236 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 LIX1Q8N485 282 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 ZNF614Q8N883 585 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 AVL9Q8NBF6 648 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 OR5K2Q8NHB8 316 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 GRHL3Q8TE85 626 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 NAT14Q8WUY8 206 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 SLC5A11Q8WWX8 675 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 SMPDL3AQ92484 453 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 TFGQ92734 400 aaPredicted RBP4.3□□□□□ -1.72
VPS29-212ENST00000621131 KLK6Q92876 244 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 POP5Q969H6 163 aaKnown RBP4.3□□□□□ -1.72
VPS29-212ENST00000621131 FAM131CQ96AQ9 280 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 CXorf40BQ96DE9 158 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 SPDL1Q96EA4 605 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 C12orf66Q96MD2 445 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 DACH2Q96NX9 599 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 SH3GL1Q99961 368 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 RBM4BQ9BQ04 359 aaKnown RBP4.3□□□□□ -1.72
VPS29-212ENST00000621131 CABLES2Q9BTV7 478 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 VCXQ9H320 206 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 MUC13Q9H3R2 512 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 RNPEPL1Q9HAU8 725 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 SDR39U1Q9NRG7 319 aaPredicted RBP4.3□□□□□ -1.72
VPS29-212ENST00000621131 AHSPQ9NZD4 102 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 PRDM4Q9UKN5 801 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 DUSP12Q9UNI6 340 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 SLC22A14Q9Y267 594 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 RNF11Q9Y3C5 154 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 OR1A2Q9Y585 309 aa4.3□□□□□ -1.72
VPS29-212ENST00000621131 LRRK1Q38SD2 2015 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 F5P12259 2224 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 IGHV4-4A0A075B6R2 117 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 A0A1W2PP18 115 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 ANKDD1BA6NHY2 528 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PRR32B1ATL7 298 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 E7EQ34 232 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PRAMEF26H0Y7S4 382 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 H0YIV9 168 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 LSM1O15116 133 aaKnown RBP4.29□□□□□ -1.72
VPS29-212ENST00000621131 NVLO15381 856 aaKnown RBP4.29□□□□□ -1.72
VPS29-212ENST00000621131 SLC31A1O15431 190 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 EEDO75530 441 aaKnown RBP4.29□□□□□ -1.72
VPS29-212ENST00000621131 PDE5AO76074 875 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PSMG1O95456 288 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 ANP32DO95626 131 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 SLC16A8O95907 504 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PDYNP01213 254 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 TNFP01375 233 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 C1GALT1C1LP0DN25 315 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 GABRG2P18507 467 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 JAK1P23458 1154 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 IMPA1P29218 277 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PDHA2P29803 388 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PRDX3P30048 256 aaKnown RBP4.29□□□□□ -1.72
VPS29-212ENST00000621131 CMPK1P30085 196 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 S100A3P33764 101 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 SHMT2P34897 504 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 TPMTP51580 245 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 MTTPP55157 894 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PFN3P60673 137 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PSME3P61289 254 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 LGALS3BPQ08380 585 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 TRAP1Q12931 704 aaKnown RBP4.29□□□□□ -1.72
VPS29-212ENST00000621131 BNIP2Q12982 314 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 DOC2AQ14183 400 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 RCAN2Q14206 197 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 FLOT2Q14254 428 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 RCN1Q15293 331 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 TCTE1Q5JU00 501 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 ENPP7Q6UWV6 458 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 MSANTD1Q6ZTZ1 278 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 PAGE2Q7Z2X7 111 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 GALNT5Q7Z7M9 940 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 DHDDSQ86SQ9 333 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 SFRP1Q8N474 314 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 CATSPER1Q8NEC5 780 aa4.29□□□□□ -1.72
VPS29-212ENST00000621131 TTLQ8NG68 377 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms