RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 THBS4P35443 961 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 SERPINB8P50452 374 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 ATP12AP54707 1039 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 POU6F2P78424 691 aaPredicted RBP3.93□□□□□ -1.78
SNCA-213ENST00000618500 SLC17A1Q14916 467 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 SYT14P1Q58G82 188 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 TMEM107Q6UX40 140 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 TRIM46Q7Z4K8 759 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 ANKS4BQ8N8V4 417 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 OR4F6Q8NGB9 312 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 OR4C3Q8NH37 302 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 ADAMTS15Q8TE58 950 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 CCDC106Q9BWC9 280 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 CAB39LQ9H9S4 337 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 TMEM45AQ9NWC5 275 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 SENP1Q9P0U3 644 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 CARD8Q9Y2G2 431 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 CMAHPQ9Y471 501 aa3.93□□□□□ -1.78
SNCA-213ENST00000618500 IGHV2OR16-5A0A0B4J2B6 119 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 KLF11O14901 512 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 PIN1P1O15428 100 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 ZNF264O43296 627 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 PLPP2O43688 288 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 BANF1O75531 89 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 GBAP04062 536 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 F13BP05160 661 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 CECR9P0C854 216 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 UBL4AP11441 157 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 GFAPP14136 432 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 TCEA1P23193 301 aaKnown RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 SLC7A1P30825 629 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 RELBQ01201 579 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 QPRTQ15274 297 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 PPP1R7Q15435 360 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SLC9A3R2Q15599 337 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 TBRG1Q3YBR2 411 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 TTC19Q6DKK2 380 aaPredicted RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 ALKBH2Q6NS38 261 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SPATA19Q7Z5L4 167 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 DPPA2Q7Z7J5 298 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 C1orf174Q8IYL3 243 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SIGLECL1Q8N7X8 197 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SELENOMQ8WWX9 145 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 YIPF5Q969M3 257 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 RBM4BQ9BQ04 359 aaKnown RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 NELFAQ9H3P2 528 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 PFDN4Q9NQP4 134 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 ZNF275Q9NSD4 429 aaPredicted RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 TXNDC16Q9P2K2 825 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 MOKQ9UQ07 419 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SLC35A3Q9Y2D2 325 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 PKD1L1Q8TDX9 2849 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 LOC105371242A0A075B767 164 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 LOC102725191A0A1B0GVB3 256 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 CCT8L1PA6NM43 557 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SRRM5B3KS81 715 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SMIM24O75264 130 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 FOXH1O75593 365 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 VAMP5O95183 116 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 AVPP01185 164 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 IGHMP01871 453 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 NR4A1P22736 598 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SFTPDP35247 375 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 GLRXP35754 106 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 CRYBB2P43320 205 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 ETF1P62495 437 aaKnown RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 PFKFB4Q16877 469 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 PRSS53Q2L4Q9 553 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 LETMD1Q6P1Q0 360 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 LEG1Q6P5S2 330 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 PAQR6Q6TCH4 344 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 RBMS3Q6XE24 437 aaKnown RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 GRINAQ7Z429 371 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 CDK20Q8IZL9 346 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 ADPRHL1Q8NDY3 354 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 OR2W6PQ8NHA6 318 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 EXOSC8Q96B26 276 aaKnown RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 L3HYPDHQ96EM0 354 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 ZNF75AQ96N20 296 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 VRK1Q99986 396 aaPredicted RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 ACPTQ9BZG2 426 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 TCF7L2Q9NQB0 619 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 REV1Q9UBZ9 1251 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 CGGBP1Q9UFW8 167 aaPredicted RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 GPR160Q9UJ42 338 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 KMT2CQ8NEZ4 4911 aaKnown RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 FREM1Q5H8C1 2179 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 IGLV3-9A0A075B6K5 115 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 CLPSL1A2RUU4 121 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 AQP7P3A6NL99 342 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 M0R233 179 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 PDPK1O15530 556 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 MGRN1O60291 552 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SH3BGRLO75368 114 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 CD55P08174 381 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 ZNF35P13682 527 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 PTNP21246 168 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 RPL3P39023 403 aaKnown RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 ALDH9A1P49189 494 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 IL1RL1Q01638 556 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms