RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 TESMINQ9Y4I5 508 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 PRKD3O94806 890 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 SLC6A2P23975 617 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 UGT2B10P36537 528 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 ACAA2P42765 397 aaKnown RBP14.23□□□□□ -0.13
BRCA1-228ENST00000618469 KLF10Q13118 480 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 TRMT5Q32P41 509 aaKnown RBP14.23□□□□□ -0.13
BRCA1-228ENST00000618469 ABLIM2Q6H8Q1 611 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 WBP2NLQ6ICG8 309 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 STK32CQ86UX6 486 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 C10orf82Q8WW14 230 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 DDIT4LQ96D03 193 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 DACH2Q96NX9 599 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 PSD2Q9BQI7 771 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 TACO1Q9BSH4 297 aaKnown RBP14.23□□□□□ -0.13
BRCA1-228ENST00000618469 MED18Q9BUE0 208 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 SPATA5L1Q9BVQ7 753 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 KLHL4Q9C0H6 718 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 GP6Q9HCN6 339 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 SAR1AQ9NR31 198 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 DLL4Q9NR61 685 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 PLSCR4Q9NRQ2 329 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 KLHL28Q9NXS3 571 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 NDRG3Q9UGV2 375 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 ST6GALNAC2Q9UJ37 374 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 HDGFL3Q9Y3E1 203 aa14.23□□□□□ -0.13
BRCA1-228ENST00000618469 FLNAP21333 2647 aaKnown RBP14.22□□□□□ -0.13
BRCA1-228ENST00000618469 ZC3H12DA2A288 527 aaKnown RBP14.22□□□□□ -0.13
BRCA1-228ENST00000618469 C16orf97H3BN30 126 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 FBP2O00757 339 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 ZNF208O43345 1280 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 CYTIPO60759 359 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 PMS2P2O95744 297 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 PRKAR1BP31321 381 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 OR2B6P58173 313 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 HOXC5Q00444 222 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 RASGEF1BQ0VAM2 473 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 POU4F3Q15319 338 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 MAPRE2Q15555 327 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 ADRM1Q16186 407 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 MMEL1Q495T6 779 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 REP15Q6BDI9 236 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 TFAP2EQ6VUC0 442 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 NUFIP2Q7Z417 695 aaKnown RBP14.22□□□□□ -0.13
BRCA1-228ENST00000618469 SNX32Q86XE0 403 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 C11orf65Q8NCR3 313 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 HIPK4Q8NE63 616 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 ZNF317Q96PQ6 595 aaPredicted RBP14.22□□□□□ -0.13
BRCA1-228ENST00000618469 ZNF300Q96RE9 604 aaPredicted RBP14.22□□□□□ -0.13
BRCA1-228ENST00000618469 MDFIQ99750 246 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 BCO1Q9HAY6 547 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 RASSF1Q9NS23 344 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 CAPN7Q9Y6W3 813 aa14.22□□□□□ -0.13
BRCA1-228ENST00000618469 BBIP1A8MTZ0 92 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 MRASO14807 208 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 YES1P07947 543 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 CXCR1P25024 350 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 FKBP2P26885 142 aaKnown RBP14.21□□□□□ -0.13
BRCA1-228ENST00000618469 PCYT1AP49585 367 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 CLK1P49759 484 aaKnown RBP14.21□□□□□ -0.13
BRCA1-228ENST00000618469 ADAM8P78325 824 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 DAZAP2Q15038 168 aaPredicted RBP14.21□□□□□ -0.13
BRCA1-228ENST00000618469 DHRS4L2Q6PKH6 230 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 BEND4Q6ZU67 534 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 COMTD1Q86VU5 262 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 PTOV1Q86YD1 416 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 C3orf49Q96BT1 292 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 ZNF607Q96SK3 696 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 ADAM19Q9H013 955 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 FANCFQ9NPI8 374 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 TMEM181Q9P2C4 612 aa14.21□□□□□ -0.13
BRCA1-228ENST00000618469 ING1Q9UK53 422 aaPredicted RBP14.21□□□□□ -0.13
BRCA1-228ENST00000618469 HRNRQ86YZ3 2850 aaPredicted RBP14.21□□□□□ -0.13
BRCA1-228ENST00000618469 VPS13CQ709C8 3753 aa14.21□□□□□ -0.14
BRCA1-228ENST00000618469 PRORSD1PA6NEY8 169 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 FXYD1O00168 92 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 CASKO14936 926 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 DNPH1O43598 174 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 TPST1O60507 370 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 IMPDH2P12268 514 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 IDUAP35475 653 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 MAP2K6P52564 334 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 NCALDP61601 193 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 BNIP2Q12982 314 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 GLIPR1L2Q4G1C9 344 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 COQ5Q5HYK3 327 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 ANKRD34AQ69YU3 496 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.2□□□□□ -0.14
BRCA1-228ENST00000618469 MTDHQ86UE4 582 aaKnown RBP14.2□□□□□ -0.14
BRCA1-228ENST00000618469 CDC20BQ86Y33 519 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 ARMC8Q8IUR7 673 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 PIGXQ8TBF5 258 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 SLC35B4Q969S0 331 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 ZNF775Q96BV0 537 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-228ENST00000618469 ZC3HAV1LQ96H79 300 aaKnown RBP14.2□□□□□ -0.14
BRCA1-228ENST00000618469 WFIKKN1Q96NZ8 548 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 RSPO3Q9BXY4 272 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-228ENST00000618469 KAT8Q9H7Z6 458 aaKnown RBP14.2□□□□□ -0.14
BRCA1-228ENST00000618469 EMC3Q9P0I2 261 aa14.2□□□□□ -0.14
BRCA1-228ENST00000618469 ARMCX1Q9P291 453 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms